12 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Shewana3_4165  CDS  NC_008573  30965  31375  411  hypothetical protein  YP_863681  normal  decreased coverage  0.00650831  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4178  CDS  NC_008573  44721  45335  615  hypothetical protein  YP_863694  decreased coverage  0.00705375  normal  0.0874836  Shewanella sp. ANA-3  Bacteria 
 
 
-
 
Shewana3_4208  CDS  NC_008573  76728  78023  1296  hypothetical protein  YP_863724  decreased coverage  7.59939e-05  normal  Shewanella sp. ANA-3  Bacteria 
 
 
-
 
Shewana3_4245  CDS  NC_008573  120669  121280  612  mobile mystery protein B  YP_863760  normal  decreased coverage  0.000130634  Shewanella sp. ANA-3  Bacteria 
 
 
-
 
Shewana3_4246  CDS  NC_008573  121277  121765  489  XRE family transcriptional regulator  YP_863761  normal  decreased coverage  0.000130634  Shewanella sp. ANA-3  Bacteria 
 
 
-
 
Shewana3_4247  CDS  NC_008573  122362  123075  714  TatD-related deoxyribonuclease  YP_863762  normal  0.555643  decreased coverage  0.000153731  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4248  CDS  NC_008573  123084  124388  1305  hypothetical protein  YP_863763  normal  0.947193  decreased coverage  0.000181911  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4249  CDS  NC_008573  124385  125137  753  hypothetical protein  YP_863764  normal  decreased coverage  0.000156109  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4250  CDS  NC_008573  125137  126921  1785  KAP P-loop domain-containing protein  YP_863765  normal  decreased coverage  0.000235835  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4270  CDS  NC_008573  147519  148514  996  hypothetical protein  YP_863785  decreased coverage  1.07556e-05  normal  0.839186  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4280  CDS  NC_008573  161679  164060  2382  putative periplasmic protein  YP_863795  decreased coverage  0.00284905  normal  Shewanella sp. ANA-3  Bacteria 
 
 
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Shewana3_4296  CDS  NC_008573  179552  180232  681  DNA-binding transcriptional activator CusR  YP_863811  decreased coverage  2.52174e-05  normal  Shewanella sp. ANA-3  Bacteria 
 
 
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