28 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
P9211_00081  CDS  NC_009976  11415  12050  636  transcription antitermination protein NusB  YP_001549893  normal  decreased coverage  0.000149068  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_00091  CDS  NC_009976  12050  13384  1335  signal recognition particle docking protein FtsY  YP_001549894  normal  decreased coverage  0.000209396  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_01321  CDS  NC_009976  130447  130839  393  hypothetical protein  YP_001550017  decreased coverage  0.00565466  normal  0.345685  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_03021  CDS  NC_009976  286106  286690  585  orotate phosphoribosyltransferase  YP_001550187  decreased coverage  4.52779e-05  normal  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_04841  CDS  NC_009976  452725  454023  1299  glutamate-1-semialdehyde aminotransferase  YP_001550369  decreased coverage  0.00934887  normal  0.931792  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_05031  CDS  NC_009976  472100  472462  363  hypothetical protein  YP_001550388  decreased coverage  0.00611684  normal  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_05041  CDS  NC_009976  472525  472902  378  hypothetical protein  YP_001550389  decreased coverage  0.00239155  normal  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_06941  CDS  NC_009976  607122  607469  348  anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)  YP_001550579  decreased coverage  0.00555121  normal  0.159245  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08241  CDS  NC_009976  724768  726420  1653  Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB  YP_001550709  normal  0.856004  decreased coverage  1.76206e-05  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08251  CDS  NC_009976  726420  727712  1293  hypothetical protein  YP_001550710  normal  0.328672  decreased coverage  1.33255e-05  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08931  CDS  NC_009976  791933  794437  2505  phenylalanyl-tRNA synthetase subunit beta  YP_001550778  normal  0.467019  decreased coverage  5.63519e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08941  CDS  NC_009976  794553  794750  198  50S ribosomal protein L33  YP_001550779  normal  0.330509  decreased coverage  1.58972e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08951  CDS  NC_009976  794777  794998  222  30S ribosomal protein S18  YP_001550780  normal  0.519961  decreased coverage  1.61977e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08961  CDS  NC_009976  795050  796333  1284  ribonuclease II  YP_001550781  normal  decreased coverage  3.21128e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08971  CDS  NC_009976  796405  797934  1530  methionyl-tRNA synthetase  YP_001550782  normal  0.931117  decreased coverage  4.49236e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08981  CDS  NC_009976  797940  798599  660  hypothetical protein  YP_001550783  normal  0.800152  decreased coverage  3.09525e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_08991  CDS  NC_009976  798592  799215  624  hypothetical protein  YP_001550784  normal  0.0478763  decreased coverage  3.03801e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_09001  CDS  NC_009976  799326  799670  345  hypothetical protein  YP_001550785  normal  0.09234  decreased coverage  2.59965e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_09011  CDS  NC_009976  799719  800270  552  putative cobinamide kinase  YP_001550786  normal  0.0761087  decreased coverage  2.65006e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_09021  CDS  NC_009976  800267  800755  489  SpoU family tRNA/rRNA methyltransferase  YP_001550787  normal  0.149348  decreased coverage  2.59965e-07  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_11951  CDS  NC_009976  1077854  1078258  405  deoxyribonuclease  YP_001551080  decreased coverage  0.00575992  normal  0.278967  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_11961  CDS  NC_009976  1078335  1079204  870  3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase  YP_001551081  decreased coverage  0.00909037  normal  0.198158  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_12661  CDS  NC_009976  1142103  1143056  954  SMR family transporter PecM  YP_001551151  normal  decreased coverage  0.000571261  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_12671  CDS  NC_009976  1143119  1143928  810  signal peptide peptidase SppA (protease IV)  YP_001551152  normal  decreased coverage  0.000540358  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_12951  CDS  NC_009976  1168895  1169815  921  cell wall biosynthesis glycosyltransferase  YP_001551180  decreased coverage  0.00175067  normal  0.0957676  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_13641  CDS  NC_009976  1233586  1234575  990  putative cobalamin biosynthetic protein  YP_001551249  decreased coverage  0.00725389  normal  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_14411  CDS  NC_009976  1298330  1300114  1785  Flp pilus assembly protein TadD  YP_001551326  normal  decreased coverage  0.00033533  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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P9211_15501  CDS  NC_009976  1382607  1384175  1569  HSP70 family molecular chaperone  YP_001551435  decreased coverage  0.00346442  normal  Prochlorococcus marinus str. MIT 9211  Bacteria 
 
 
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