31 decreased-coverage genes were found for selected organism/s



Page 1 of 1    << first  < prev  1  next >  last >>   


Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Nmag_0125    NC_013922  144179  144654  +  476      decreased coverage  0.00020825  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0126  CDS  NC_013922  144797  145078  -  282  putative transcriptional regulator, CopG family  YP_003478285  decreased coverage  0.000113795  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0127  CDS  NC_013922  145280  145555  -  276  hypothetical protein  YP_003478286  decreased coverage  0.000113795  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0300  CDS  NC_013922  286459  287052  +  594  O-acetyltransferase  YP_003478453  decreased coverage  0.00851676  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0301  CDS  NC_013922  287313  288482  -  1170  FAD-dependent pyridine nucleotide-disulfide oxidoreductase  YP_003478454  decreased coverage  0.0071074  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0398  CDS  NC_013922  389421  390698  -  1278  protein of unknown function UPF0118  YP_003478548  decreased coverage  0.0034127  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0412  CDS  NC_013922  405576  406055  +  480  protein of unknown function DUF101  YP_003478562  decreased coverage  0.00074949  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0762  CDS  NC_013922  757732  759489  -  1758  tail sheath protein  YP_003478909  decreased coverage  0.00265038  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0945  CDS  NC_013922  972009  973265  +  1257  hypothetical protein  YP_003479091  decreased coverage  0.000913985  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_0964  CDS  NC_013922  990722  991474  +  753  ABC transporter related protein  YP_003479110  decreased coverage  0.0000527176  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1369  CDS  NC_013922  1402766  1404391  -  1626  AMP-dependent synthetase and ligase  YP_003479510  decreased coverage  0.00896755  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1604  CDS  NC_013922  1628862  1629659  +  798  hypothetical protein  YP_003479742  decreased coverage  0.00741753  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1617  CDS  NC_013922  1636410  1637624  -  1215  hypothetical protein  YP_003479755  decreased coverage  0.00330929  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1841  CDS  NC_013922  1867659  1868264  -  606  hypothetical protein  YP_003479976  decreased coverage  0.00444327  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1842  CDS  NC_013922  1868521  1869183  +  663  zinc finger SWIM domain protein  YP_003479977  decreased coverage  0.00570686  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1987  CDS  NC_013922  2020452  2020916  -  465  hypothetical protein  YP_003480120  decreased coverage  0.000170845  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_1988  CDS  NC_013922  2021084  2021503  +  420  hypothetical protein  YP_003480121  decreased coverage  0.000156708  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_2966  CDS  NC_013922  3053282  3054337  -  1056  translation initiation factor, aIF-2BII family  YP_003481080  decreased coverage  0.00871533  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_3456  CDS  NC_013922  3592233  3593411  +  1179  L-carnitine dehydratase/bile acid-inducible protein F  YP_003481568  decreased coverage  0.00954792  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_3526  CDS  NC_013922  3662557  3663147  -  591  Redoxin domain protein  YP_003481638  decreased coverage  0.00360773  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_3558  CDS  NC_013922  3695948  3696700  -  753  hypothetical protein  YP_003481670  decreased coverage  0.00182407  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_3596  CDS  NC_013922  3736464  3738404  -  1941  membrane-flanked domain protein  YP_003481708  decreased coverage  0.000563429  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_3597  CDS  NC_013922  3738410  3738871  -  462  membrane-flanked domain protein  YP_003481709  decreased coverage  0.0000241745  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_3862  CDS  NC_013923  256549  257631  +  1083  spermidine/putrescine ABC transporter ATPase subunit  YP_003481965  decreased coverage  0.000929662  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_4000  CDS  NC_013924  43900  44451  -  552  hypothetical protein  YP_003482095  decreased coverage  0.00280828  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_4001  CDS  NC_013924  44664  45950  -  1287  amidase, hydantoinase/carbamoylase family  YP_003482096  decreased coverage  0.00670775  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_4002  CDS  NC_013924  46052  46582  +  531  orotate phosphoribosyltransferase  YP_003482097  decreased coverage  0.00738468  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_4073  CDS  NC_013924  114683  115612  -  930  ABC transporter related protein  YP_003482160  decreased coverage  0.00347724  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_4290  CDS  NC_013925  47097  47672  -  576  glutamine amidotransferase class-II  YP_003482360  decreased coverage  0.00198721  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_4291  CDS  NC_013925  47677  48708  -  1032  hypothetical protein  YP_003482361  decreased coverage  0.00161224  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Nmag_R0021  tRNA  NC_013922  1629759  1629832  +  74  tRNA-Lys    decreased coverage  0.00204065  n/a    Natrialba magadii ATCC 43099  Archaea 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>