7 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Afer_0020  CDS  NC_013124  18791  20422  1632  Chitinase  YP_003108668  decreased coverage  0.00474187  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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Afer_1405  CDS  NC_013124  1467021  1468199  1179  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  YP_003110002  decreased coverage  0.00776945  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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Afer_1483  CDS  NC_013124  1554151  1554957  807  hypothetical protein  YP_003110079  decreased coverage  4.03097e-06  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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Afer_1505  CDS  NC_013124  1570853  1571410  558  RNA polymerase, sigma-24 subunit, ECF subfamily  YP_003110101  decreased coverage  0.00989017  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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Afer_1789  CDS  NC_013124  1874059  1874643  585  transcriptional regulator, TetR family  YP_003110376  decreased coverage  0.00598195  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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Afer_2004  CDS  NC_013124  2120900  2121637  738  regulatory protein GntR HTH  YP_003110579  decreased coverage  0.00794918  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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Afer_R0010  tRNA  NC_013124  392035  392117  83  tRNA-Tyr    decreased coverage  0.00640732  n/a    Acidimicrobium ferrooxidans DSM 10331  Bacteria 
 
 
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