30 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Tbis_0003  CDS  NC_014165  3637  4581  945  6-phosphogluconate dehydrogenase  YP_003650633  decreased coverage  0.00950431  normal  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0052  CDS  NC_014165  60350  61732  1383  cell cycle protein  YP_003650682  decreased coverage  0.00121731  normal  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0483  CDS  NC_014165  534287  535165  879  methyltransferase  YP_003651104  decreased coverage  0.00128266  normal  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0532  CDS  NC_014165  584160  586031  1872  acyl-CoA dehydrogenase domain-containing protein  YP_003651152  normal  decreased coverage  0.00508335  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0533  CDS  NC_014165  586872  587654  783  type 12 methyltransferase  YP_003651153  normal  0.324241  decreased coverage  0.00341349  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0718  CDS  NC_014165  795373  796431  1059  family 2 glycosyl transferase  YP_003651336  normal  decreased coverage  0.00805458  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0719  CDS  NC_014165  796685  798049  1365  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase  YP_003651337  normal  decreased coverage  0.0088234  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0733  CDS  NC_014165  816227  816520  294  hypothetical protein  YP_003651351  normal  decreased coverage  0.00443232  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_0963  CDS  NC_014165  1086734  1087423  690  hypothetical protein  YP_003651579  decreased coverage  0.00413746  normal  0.456593  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1071  CDS  NC_014165  1215512  1216384  873  1,4-dihydroxy-2-naphthoateoctaprenyltransferase  YP_003651686  normal  decreased coverage  0.00289037  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1072  CDS  NC_014165  1216980  1217588  609  GCN5-related N-acetyltransferase  YP_003651687  normal  decreased coverage  0.00258102  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1073  CDS  NC_014165  1217628  1218329  702  hypothetical protein  YP_003651688  normal  decreased coverage  0.00265826  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1075  CDS  NC_014165  1219817  1220770  954  hypothetical protein  YP_003651690  normal  decreased coverage  0.00290318  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1076  CDS  NC_014165  1220834  1221289  456  GntR family transcriptional regulator  YP_003651691  normal  decreased coverage  0.0019673  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1077  CDS  NC_014165  1221413  1222087  675  DNA repair protein RadC  YP_003651692  normal  decreased coverage  0.00218875  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1083  CDS  NC_014165  1228796  1230055  1260  mandelate racemase/muconate lactonizing protein  YP_003651698  decreased coverage  0.00426043  hitchhiker  0.00242262  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1084  CDS  NC_014165  1230049  1230954  906  dihydrodipicolinate synthetase  YP_003651699  decreased coverage  0.00262766  hitchhiker  0.00208818  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1085  CDS  NC_014165  1231293  1232096  804  NAD-dependent epimerase/dehydratase  YP_003651700  hitchhiker  0.00605708  decreased coverage  0.00179082  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1086  CDS  NC_014165  1232098  1233570  1473  aldehyde dehydrogenase  YP_003651701  normal  0.0121968  decreased coverage  0.00153229  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1314  CDS  NC_014165  1488658  1490265  1608  EmrB/QacA subfamily drug resistance transporter  YP_003651926  decreased coverage  0.00952843  normal  0.308238  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1344  CDS  NC_014165  1521043  1522119  1077  polyprenyl synthetase  YP_003651955  normal  0.522192  decreased coverage  0.000335452  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1530  CDS  NC_014165  1735910  1736893  984  CRISPR-associated protein Cas1  YP_003652139  decreased coverage  0.00231307  normal  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1921  CDS  NC_014165  2224030  2225835  1806  methylmalonyl-CoA mutase  YP_003652526  decreased coverage  0.00796016  normal  0.671948  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_1931  CDS  NC_014165  2240171  2241460  1290  hypothetical protein  YP_003652536  decreased coverage  0.00823138  normal  0.409118  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_2124  CDS  NC_014165  2468341  2469225  885  cobalamin (vitamin B12) biosynthesis CbiX protein  YP_003652728  decreased coverage  0.00535032  normal  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_2367  CDS  NC_014165  2758819  2759988  1170  family 2 glycosyl transferase  YP_003652965  normal  decreased coverage  0.00481537  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_2368  CDS  NC_014165  2759960  2761237  1278  putative PucR family transcriptional regulator  YP_003652966  normal  decreased coverage  0.00862332  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_2520  CDS  NC_014165  2954463  2954807  345  hypothetical protein  YP_003653115  decreased coverage  0.00287974  normal  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_3120  CDS  NC_014165  3661821  3663185  1365  hypothetical protein  YP_003653707  normal  decreased coverage  4.16612e-08  Thermobispora bispora DSM 43833  Bacteria 
 
 
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Tbis_3121  CDS  NC_014165  3663338  3664558  1221  acetyl-CoA acetyltransferase  YP_003653708  normal  decreased coverage  9.6812e-08  Thermobispora bispora DSM 43833  Bacteria 
 
 
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