18 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
MmarC6_0001  CDS  NC_009975  816  1151  336  hypothetical protein  YP_001548059  decreased coverage  0.00209725  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0056  CDS  NC_009975  48858  49403  546  hypothetical protein  YP_001548114  decreased coverage  0.000388029  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0116  CDS  NC_009975  94586  95269  684  hypothetical protein  YP_001548172  decreased coverage  0.00531736  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0351  CDS  NC_009975  314910  315551  642  phosphoserine phosphatase SerB  YP_001548404  decreased coverage  0.00704526  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0448  CDS  NC_009975  410601  410795  195  hypothetical protein  YP_001548498  decreased coverage  6.59386e-05  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0586  CDS  NC_009975  537392  538579  1188  polysaccharide pyruvyl transferase  YP_001548635  decreased coverage  0.00188852  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0601  CDS  NC_009975  552627  553928  1302  hypothetical protein  YP_001548650  decreased coverage  0.007011  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_0868  CDS  NC_009975  808318  809850  1533  glutamate synthase (NADPH)  YP_001548915  decreased coverage  0.00172644  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1106  CDS  NC_009975  1040908  1041627  720  tetrahydromethanopterin S-methyltransferase subunit A  YP_001549152  decreased coverage  0.000297969  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1169  CDS  NC_009975  1096382  1097545  1164  pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein  YP_001549214  decreased coverage  0.00369986  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1242  CDS  NC_009975  1158163  1159104  942  2-phosphoglycerate kinase  YP_001549287  decreased coverage  0.0009384  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1267  CDS  NC_009975  1176327  1176635  309  translation initiation factor Sui1  YP_001549312  decreased coverage  7.76224e-12  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1377  CDS  NC_009975  1278644  1279807  1164  coenzyme F420 hydrogenase/dehydrogenase beta subunit  YP_001549422  decreased coverage  0.00118672  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1494  CDS  NC_009975  1399789  1400913  1125  periplasmic binding protein  YP_001549539  decreased coverage  0.00826016  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1526  CDS  NC_009975  1425044  1425754  711  metallophosphoesterase  YP_001549571  decreased coverage  0.0019874  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1597  CDS  NC_009975  1492061  1493905  1845  hypothetical protein  YP_001549641  decreased coverage  2.03225e-09  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1598  CDS  NC_009975  1493939  1494556  618  hypothetical protein  YP_001549642  decreased coverage  4.68439e-09  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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MmarC6_1681  CDS  NC_009975  1580228  1581010  783  cobyrinic acid ac-diamide synthase  YP_001549725  decreased coverage  0.00843819  n/a    Methanococcus maripaludis C6  Archaea 
 
 
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