61 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Oant_0021  CDS  NC_009667  21700  23517  1818  DNA polymerase III subunits gamma and tau  YP_001368581  decreased coverage  0.00653224  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0049  CDS  NC_009667  53094  55073  1980  cytochrome o ubiquinol oxidase subunit I  YP_001368609  decreased coverage  0.00345091  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0198  CDS  NC_009667  218175  218882  708  autoinducer-binding domain-containing protein  YP_001368758  decreased coverage  1.29067e-06  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0221  CDS  NC_009667  237500  238366  867  hypothetical protein  YP_001368781  decreased coverage  3.73932e-06  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0446  CDS  NC_009667  475611  476729  1119  TRAP dicarboxylate transporter- DctP subunit  YP_001369006  decreased coverage  0.00272496  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0466  CDS  NC_009667  500928  501791  864  cytochrome c oxidase, cbb3-type, subunit III  YP_001369026  decreased coverage  0.00151581  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0467  CDS  NC_009667  501784  501942  159  Cbb3-type cytochrome oxidase component  YP_001369027  decreased coverage  5.40469e-05  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0572  CDS  NC_009667  600882  601118  237  acyl carrier protein  YP_001369132  decreased coverage  0.000726263  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0706  CDS  NC_009667  734617  736203  1587  integrase catalytic region  YP_001369258  decreased coverage  0.00978905  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0714    NC_009667  742971  743615  645      decreased coverage  4.40165e-05  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0769  CDS  NC_009667  798322  799638  1317  phosphate ABC transporter, inner membrane subunit PstA  YP_001369320  decreased coverage  0.00852875  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_0893  CDS  NC_009667  929458  929790  333  XRE family transcriptional regulator  YP_001369444  decreased coverage  0.00171565  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1033  CDS  NC_009667  1068357  1069103  747  3-demethylubiquinone-9 3-methyltransferase  YP_001369583  decreased coverage  0.00915374  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1133  CDS  NC_009667  1193016  1193354  339  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  YP_001369682  decreased coverage  9.03246e-06  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1159  CDS  NC_009667  1223054  1224184  1131  hypothetical protein  YP_001369706  decreased coverage  0.000167341  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1189  CDS  NC_009667  1259699  1260706  1008  glyceraldehyde-3-phosphate dehydrogenase, type I  YP_001369735  decreased coverage  0.0040441  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1312  CDS  NC_009667  1389606  1390262  657  methionine sulfoxide reductase A  YP_001369858  decreased coverage  1.06862e-06  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1408  CDS  NC_009667  1488428  1489882  1455  major facilitator transporter  YP_001369954  decreased coverage  9.66462e-05  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1553  CDS  NC_009667  1632262  1633437  1176  hypothetical protein  YP_001370098  decreased coverage  0.00100593  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1580  CDS  NC_009667  1654086  1654433  348  regulatory protein ArsR  YP_001370125  decreased coverage  0.0014541  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1675  CDS  NC_009667  1756620  1757102  483  hypothetical protein  YP_001370220  decreased coverage  0.00317924  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1676  CDS  NC_009667  1757170  1757379  210  cold-shock DNA-binding domain-containing protein  YP_001370221  decreased coverage  0.00586625  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1750  CDS  NC_009667  1839144  1840841  1698  cell division protein FtsZ  YP_001370295  decreased coverage  0.000567765  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1950  CDS  NC_009667  2055587  2055760  174  hypothetical protein  YP_001370495  decreased coverage  5.14078e-08  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1956  CDS  NC_009667  2060474  2061190  717  50S ribosomal protein L3  YP_001370501  decreased coverage  0.00677731  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1971  CDS  NC_009667  2067362  2067895  534  50S ribosomal protein L6  YP_001370516  decreased coverage  0.000104023  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_1972  CDS  NC_009667  2067908  2068270  363  50S ribosomal protein L18  YP_001370517  decreased coverage  0.000177032  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2028  CDS  NC_009667  2119008  2119847  840  hypothetical protein  YP_001370573  decreased coverage  0.0094929  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2098  CDS  NC_009667  2195184  2196557  1374  glutamyl-tRNA synthetase  YP_001370643  decreased coverage  0.00800716  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2283  CDS  NC_009667  2412259  2412513  255  hypothetical protein  YP_001370828  decreased coverage  0.00698751  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2328  CDS  NC_009667  2449400  2449780  381  hypothetical protein  YP_001370871  decreased coverage  0.00898416  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2485  CDS  NC_009667  2614730  2615977  1248  extracellular solute-binding protein  YP_001371027  decreased coverage  0.00421769  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2579  CDS  NC_009667  2705377  2707497  2121  nitrate reductase  YP_001371121  decreased coverage  0.00860061  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2783  CDS  NC_009668  37268  38086  819  binding-protein-dependent transport systems inner membrane component  YP_001371321  decreased coverage  0.00231689  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_2864  CDS  NC_009668  144784  145725  942  formate dehydrogenase, beta subunit  YP_001371401  decreased coverage  0.00319725  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3031  CDS  NC_009668  336563  337423  861  MltA-interacting MipA family protein  YP_001371568  decreased coverage  0.00317395  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3064  CDS  NC_009668  376611  377567  957  periplasmic binding protein/LacI transcriptional regulator  YP_001371601  decreased coverage  0.00195714  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3072  CDS  NC_009668  385246  386277  1032  putative ABC transporter periplasmic sugar-binding protein  YP_001371609  decreased coverage  0.00067059  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3182  CDS  NC_009668  509562  510065  504  hypothetical protein  YP_001371719  decreased coverage  0.00860952  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3213  CDS  NC_009668  534531  534860  330  conjugal transfer protein TrbC  YP_001371750  decreased coverage  0.00593257  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3219  CDS  NC_009668  540102  540791  690  conjugal transfer protein TrbF  YP_001371756  decreased coverage  0.00389999  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3220  CDS  NC_009668  540788  541816  1029  P-type conjugative transfer protein TrbG  YP_001371757  decreased coverage  0.000858475  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3261  CDS  NC_009668  585147  586166  1020  helix-turn-helix domain-containing protein  YP_001371798  decreased coverage  2.31694e-05  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3381  CDS  NC_009668  718595  720079  1485  polysaccharide biosynthesis protein  YP_001371916  decreased coverage  0.0051743  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3416  CDS  NC_009668  758322  759491  1170  monosaccharide-transporting ATPase  YP_001371951  decreased coverage  0.00105488  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3577  CDS  NC_009668  950565  951701  1137  ABC transporter related  YP_001372112  decreased coverage  0.00156339  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3598  CDS  NC_009668  972407  973984  1578  extracellular solute-binding protein  YP_001372133  decreased coverage  0.000427863  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3677  CDS  NC_009668  1064312  1065697  1386  response regulator PleD  YP_001372212  decreased coverage  0.00345303  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3784  CDS  NC_009668  1174040  1175020  981  oligopeptide/dipeptide ABC transporter, ATPase subunit  YP_001372319  decreased coverage  0.00880915  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3804  CDS  NC_009668  1197839  1199368  1530  extracellular solute-binding protein  YP_001372339  decreased coverage  0.00625229  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3811  CDS  NC_009668  1208543  1210057  1515  Ppx/GppA phosphatase  YP_001372346  decreased coverage  0.000504204  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_3934  CDS  NC_009668  1348874  1349314  441  hypothetical protein  YP_001372468  decreased coverage  0.00368305  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4084  CDS  NC_009668  1514070  1515032  963  iron-enterobactin transporter periplasmic binding protein  YP_001372616  decreased coverage  0.00166295  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4119  CDS  NC_009668  1550919  1552328  1410  PTS system galactitol-specific IIC component  YP_001372650  decreased coverage  0.00198911  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4424  CDS  NC_009668  1857657  1858862  1206  branched-chain amino acid ABC transporter, periplasmic substrate-binding protein  YP_001372953  decreased coverage  0.000310805  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4487  CDS  NC_009669  26315  27469  1155  extracellular ligand-binding receptor  YP_001373012  decreased coverage  0.00567759  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4510  CDS  NC_009669  48844  49644  801  ABC transporter related  YP_001373028  decreased coverage  0.00592633  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4566  CDS  NC_009669  102378  102986  609  hypothetical protein  YP_001373082  decreased coverage  0.00592633  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4680  CDS  NC_009671  41856  42368  513  hypothetical protein  YP_001373279  decreased coverage  0.00692591  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4681  CDS  NC_009671  42899  43390  492  hypothetical protein  YP_001373280  decreased coverage  0.00310759  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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Oant_4838  CDS  NC_009672  15974  16636  663  polar amino acid ABC transporter, inner membrane subunit  YP_001373338  decreased coverage  0.000566165  n/a    Ochrobactrum anthropi ATCC 49188  Bacteria 
 
 
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