15 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Nmar_0284  CDS  NC_010085  249075  250628  1554  proton-translocating NADH-quinone oxidoreductase subunit M  YP_001581618  n/a    decreased coverage  1.06102e-08  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0772  CDS  NC_010085  692293  692721  429  hypothetical protein  YP_001582106  n/a    decreased coverage  0.00837821  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0845  CDS  NC_010085  745568  745960  393  hypothetical protein  YP_001582179  n/a    decreased coverage  8.67129e-06  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0846  CDS  NC_010085  745994  747136  1143  phosphoribosylaminoimidazole carboxylase, ATPase subunit  YP_001582180  n/a    decreased coverage  1.54723e-05  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0847  CDS  NC_010085  747236  747811  576  phosphoribosylaminoimidazole carboxylase, catalytic subunit  YP_001582181  n/a    decreased coverage  9.47879e-06  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0848  CDS  NC_010085  747812  749020  1209  threonine dehydratase  YP_001582182  n/a    decreased coverage  4.60563e-06  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0849  CDS  NC_010085  749201  750037  837  hypothetical protein  YP_001582183  n/a    decreased coverage  1.23625e-05  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0850  CDS  NC_010085  750195  751031  837  adenylate/guanylate cyclase  YP_001582184  n/a    decreased coverage  1.30568e-05  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_0962  CDS  NC_010085  840580  841332  753  hypothetical protein  YP_001582296  n/a    decreased coverage  0.000273165  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_1320  CDS  NC_010085  1206022  1208469  2448  DEAD/DEAH box helicase domain-containing protein  YP_001582654  n/a    decreased coverage  7.20865e-12  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_1321  CDS  NC_010085  1208508  1209338  831  short-chain dehydrogenase/reductase SDR  YP_001582655  n/a    decreased coverage  2.24332e-12  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_1322  CDS  NC_010085  1209416  1211071  1656  2-alkenal reductase  YP_001582656  n/a    decreased coverage  2.4346e-13  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_1526  CDS  NC_010085  1386804  1388972  2169  thrombospondin type 3 repeat-containing protein  YP_001582860  n/a    decreased coverage  2.58397e-09  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_1527  CDS  NC_010085  1389055  1391223  2169  thrombospondin type 3 repeat-containing protein  YP_001582861  n/a    decreased coverage  4.97915e-10  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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Nmar_1528  CDS  NC_010085  1391235  1393613  2379  ATPase  YP_001582862  n/a    decreased coverage  4.53148e-09  Nitrosopumilus maritimus SCM1  Archaea 
 
 
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