121 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
SNSL254_A0154  CDS  NC_011080  165834  166877  +  1044  guanosine 5'-monophosphate oxidoreductase  YP_002039373  decreased coverage  0.000490332  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0155  CDS  NC_011080  166908  168110  -  1203  type IV pilin biogenesis protein  YP_002039374  decreased coverage  0.000866014  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0322  CDS  NC_011080  339872  340318  +  447  putative cytoplasmic protein  YP_002039529  normal  1  decreased coverage  0.00238894  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0384  CDS  NC_011080  393244  393987  +  744  putative response regulator  YP_002039582  decreased coverage  0.00164652  hitchhiker  0.00364689  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0396  CDS  NC_011080  406348  407601  +  1254  major facilitator superfamily MFS_1  YP_002039594  normal  0.786385  decreased coverage  4.1004499999999995e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0397  CDS  NC_011080  407790  409748  +  1959  type III restriction-modification system StyLTI enzyme mod  YP_002039595  normal  1  decreased coverage  1.4274e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0448  CDS  NC_011080  463288  463869  -  582  acyl carrier protein phosphodiesterase  YP_002039644  decreased coverage  0.00566103  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0492  CDS  NC_011080  502995  504476  -  1482  muropeptide transporter  YP_002039687  hitchhiker  0.00144184  decreased coverage  0.00023941  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0590  CDS  NC_011080  603516  604901  +  1386  cysteinyl-tRNA synthetase  YP_002039781  decreased coverage  0.00144184  normal  0.0627987  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0796  CDS  NC_011080  809172  810380  +  1209  dihydrolipoamide succinyltransferase  YP_002039974  decreased coverage  0.00078998  normal  0.104109  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0807  CDS  NC_011080  817513  817917  +  405  acyl-CoA thioester hydrolase YbgC  YP_002039985  decreased coverage  0.000852325  normal  0.479233  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0816  tRNA  NC_011080  823510  823585  +  76  tRNA-Lys    decreased coverage  0.0000928863  normal  0.881933  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0817  tRNA  NC_011080  823634  823711  +  78  tRNA-Lys    decreased coverage  0.0000862266  normal  0.885127  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A0993  CDS  NC_011080  997185  997679  +  495  leucine-responsive transcriptional regulator  YP_002040158  decreased coverage  0.000182939  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1046  CDS  NC_011080  1061742  1064627  -  2886  gifsy-1 prophage RecE  YP_002040211  normal  0.74306  decreased coverage  0.00000020097  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1047  CDS  NC_011080  1064754  1064990  -  237  hypothetical protein  YP_002040212  decreased coverage  0.00211833  hitchhiker  0.000000991204  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1048  CDS  NC_011080  1065075  1065233  -  159  hypothetical protein  YP_002040213  decreased coverage  0.00172615  hitchhiker  0.00000103589  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1056    NC_011080  1068820  1069131  +  312      normal  1  decreased coverage  0.000000194816  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1058  CDS  NC_011080  1069791  1070024  +  234  hypothetical protein  YP_002040222  normal  0.767989  decreased coverage  0.000000199344  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1132  CDS  NC_011080  1137629  1138183  -  555  hypothetical protein  YP_002040292  normal  1  decreased coverage  3.80525e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1136  CDS  NC_011080  1142446  1142661  -  216  hypothetical protein  YP_002040296  decreased coverage  0.0000785299  hitchhiker  2.57136e-26  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1137  CDS  NC_011080  1142695  1143042  +  348  hypothetical protein  YP_002040297  decreased coverage  0.000105893  hitchhiker  3.11479e-26  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1138  CDS  NC_011080  1143065  1143289  +  225  hypothetical protein  YP_002040298  decreased coverage  0.000103897  hitchhiker  5.31565e-25  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1294  CDS  NC_011080  1281007  1281741  +  735  3-ketoacyl-(acyl-carrier-protein) reductase  YP_002040449  unclonable  0.0000278688  decreased coverage  9.664719999999999e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1295  CDS  NC_011080  1281897  1282133  +  237  acyl carrier protein  YP_002040450  unclonable  0.00000656136  decreased coverage  3.5580799999999995e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1378  CDS  NC_011080  1353976  1354617  +  642  hypothetical protein  YP_002040526  normal  0.0678824  decreased coverage  0.0000214303  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1408  CDS  NC_011080  1377579  1378622  +  1044  selenophosphate synthetase  YP_002040554  decreased coverage  0.00232464  normal  0.656366  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1574    NC_011080  1538304  1538462  -  159      decreased coverage  0.00730785  normal  0.29488  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1588  CDS  NC_011080  1555157  1556686  +  1530  NAD(P) transhydrogenase subunit alpha  YP_002040726  decreased coverage  0.00820471  normal  0.701407  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1788  CDS  NC_011080  1754890  1755576  +  687  B3/4 domain protein  YP_002040916  decreased coverage  0.00972614  normal  0.283564  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1832  CDS  NC_011080  1797870  1799039  -  1170  tetratricopeptide repeat protein  YP_002040959  decreased coverage  0.00100254  unclonable  2.05101e-30  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1952  CDS  NC_011080  1910452  1911159  +  708  septum formation inhibitor  YP_002041071  decreased coverage  0.00224738  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1954  CDS  NC_011080  1911183  1911995  +  813  cell division inhibitor MinD  YP_002041072  decreased coverage  0.00226645  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1955  CDS  NC_011080  1911999  1912265  +  267  cell division topological specificity factor MinE  YP_002041073  decreased coverage  0.00065968  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1969  CDS  NC_011080  1926902  1927870  +  969  PTS system mannose-specific transporter subunit IIAB  YP_002041086  decreased coverage  0.000485794  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1985  CDS  NC_011080  1941570  1942256  -  687  putative solute/DNA competence effector  YP_002041100  decreased coverage  0.000228326  hitchhiker  0.0069158  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1986  CDS  NC_011080  1942354  1942851  -  498  GAF domain protein  YP_002041101  decreased coverage  0.000139878  hitchhiker  0.00643853  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A1996  CDS  NC_011080  1950380  1951102  -  723  guanine nucleotide exchange factor SopE  YP_002041111  normal  1  decreased coverage  0.000141874  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2052  CDS  NC_011080  1993814  1994599  +  786  high-affinity zinc transporter membrane component  YP_002041158  decreased coverage  0.00746645  normal  0.157438  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2086  CDS  NC_011080  2026666  2027007  -  342  transcriptional activator FlhD  YP_002041192  decreased coverage  0.000128662  unclonable  1.32042e-30  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2145  CDS  NC_011080  2071681  2072304  +  624  colanic acid capsular biosynthesis activation protein A  YP_002041247  decreased coverage  0.000312117  hitchhiker  0.00586911  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2279  CDS  NC_011080  2188935  2190020  -  1086  dTDP-glucose 4,6 dehydratase  YP_002041367  normal  1  decreased coverage  0.0000000978054  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2398  CDS  NC_011080  2317448  2318578  -  1131  bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein  YP_002041479  decreased coverage  0.000898637  hitchhiker  0.000336202  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2407  CDS  NC_011080  2323721  2324467  +  747  inner membrane protein YeiU  YP_002041488  normal  1  decreased coverage  0.00000750111  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2418  CDS  NC_011080  2337655  2337939  +  285  50S ribosomal protein L25  YP_002041499  decreased coverage  0.000585469  normal  0.103403  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2514  CDS  NC_011080  2439083  2440021  -  939  HTH-type transcriptional regulator PecT  YP_002041590  decreased coverage  0.00051335  normal  0.704874  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2580  CDS  NC_011080  2501365  2502672  +  1308  long-chain fatty acid outer membrane transporter  YP_002041655  decreased coverage  0.00696507  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2622  CDS  NC_011080  2541241  2542104  +  864  putative sulfate transport protein CysZ  YP_002041689  decreased coverage  0.00041893  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2631  CDS  NC_011080  2548848  2549567  +  720  glutamine amidotransferase  YP_002041698  decreased coverage  0.0063485  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2632  CDS  NC_011080  2549626  2550006  +  381  hypothetical protein  YP_002041699  decreased coverage  0.00287639  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2744  CDS  NC_011080  2682981  2683475  -  495  DNA-binding transcriptional regulator IscR  YP_002041806  decreased coverage  0.00512244  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2758  CDS  NC_011080  2696681  2698225  +  1545  DNA-binding transcriptional activator CadC  YP_002041820  decreased coverage  0.00262539  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2838  CDS  NC_011080  2771799  2772173  +  375  hypothetical protein  YP_002041894  decreased coverage  0.000132288  normal  0.0618818  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2839  CDS  NC_011080  2772521  2772637  +  117  hypothetical protein  YP_002041895  decreased coverage  0.0000735552  normal  0.0217362  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2840  CDS  NC_011080  2772630  2772788  +  159  hypothetical protein  YP_002041896  decreased coverage  0.0000763539  normal  0.0219908  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2841  CDS  NC_011080  2772873  2773160  +  288  hypothetical protein  YP_002041897  decreased coverage  0.000099198  normal  0.0329788  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2885  CDS  NC_011080  2815510  2816028  +  519  hypothetical protein  YP_002041934  decreased coverage  0.00516229  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2887  CDS  NC_011080  2817398  2817745  -  348  50S ribosomal protein L19  YP_002041936  decreased coverage  0.00407134  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2888  CDS  NC_011080  2817786  2818553  -  768  tRNA (guanine-N(1)-)-methyltransferase  YP_002041937  decreased coverage  0.00244341  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2938  CDS  NC_011080  2869316  2870377  +  1062  phage portal protein pbsx family  YP_002041984  normal  1  decreased coverage  3.19492e-28  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2939  CDS  NC_011080  2870428  2870697  +  270  zinc-finger protein  YP_002041985  normal  1  decreased coverage  6.930430000000001e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2940  CDS  NC_011080  2870671  2870868  -  198  hypothetical protein  YP_002041986  normal  1  decreased coverage  6.930430000000001e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2941  CDS  NC_011080  2871002  2873023  -  2022  replication gene A protein  YP_002041987  normal  1  decreased coverage  2.3159e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2943  CDS  NC_011080  2873843  2874172  -  330  gp91  YP_002041989  decreased coverage  0.00436199  hitchhiker  3.58912e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2944  CDS  NC_011080  2874163  2874393  -  231  hypothetical protein  YP_002041990  decreased coverage  0.00403968  hitchhiker  2.8699699999999998e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A2945  CDS  NC_011080  2874461  2874862  -  402  hypothetical protein  YP_002041991  decreased coverage  0.00528477  hitchhiker  4.03438e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3022  CDS  NC_011080  2945631  2946197  -  567  fructose-1-phosphatase  YP_002042066  normal  0.0218888  decreased coverage  0.00000512461  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3026  tRNA  NC_011080  2946973  2947051  -  79  tRNA-Arg    unclonable  0.00000587212  decreased coverage  0.00000637793  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3027  tRNA  NC_011080  2947053  2947147  -  95  tRNA-Ser    hitchhiker  0.0000838388  decreased coverage  0.00000641147  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3028  CDS  NC_011080  2947450  2947635  -  186  carbon storage regulator  YP_002042067  hitchhiker  0.0000946533  decreased coverage  0.00000698794  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3029  CDS  NC_011080  2947870  2950500  -  2631  alanyl-tRNA synthetase  YP_002042068  normal  0.0315037  decreased coverage  0.0000367228  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3089    NC_011080  3004361  3005590  -  1230      normal  0.143682  decreased coverage  0.0000000503539  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3090  CDS  NC_011080  3005618  3007399  -  1782  cell invasion protein SipB  YP_002042126  normal  1  decreased coverage  0.0000000315688  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3207  CDS  NC_011080  3118610  3119527  -  918  DNA-binding transcriptional activator GcvA  YP_002042234  decreased coverage  0.00274599  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3237  CDS  NC_011080  3151015  3152217  -  1203  lysophospholipid transporter LplT  YP_002042259  normal  1  decreased coverage  0.00000025684  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3296  CDS  NC_011080  3205257  3205586  +  330  Z-ring-associated protein  YP_002042313  decreased coverage  0.0000920152  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3297  ncRNA  NC_011080  3205628  3205811  +  184  6S / SsrS RNA    decreased coverage  0.0000721942  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3298  CDS  NC_011080  3205832  3206446  +  615  putative ligase  YP_002042314  decreased coverage  0.000163659  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3338  CDS  NC_011080  3242671  3244065  +  1395  galactose-proton symporter  YP_002042350  decreased coverage  0.0071419  normal  0.395807  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3339  CDS  NC_011080  3244144  3244641  +  498  hypothetical protein  YP_002042351  decreased coverage  0.00105383  normal  0.150558  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3555  CDS  NC_011080  3446749  3448692  -  1944  ATP-dependent metalloprotease  YP_002042552  decreased coverage  0.00594001  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3566  CDS  NC_011080  3455265  3456377  +  1113  octaprenyl diphosphate synthase  YP_002042563  decreased coverage  0.000499434  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3608  CDS  NC_011080  3494872  3495300  -  429  50S ribosomal protein L13  YP_002042600  decreased coverage  0.000171486  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3609  CDS  NC_011080  3495602  3496726  -  1125  ATPase, AFG1 family  YP_002042601  decreased coverage  0.000949089  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3637  CDS  NC_011080  3525557  3526600  -  1044  rod shape-determining protein MreB  YP_002042629  decreased coverage  0.000940362  hitchhiker  0.00158537  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3646  CDS  NC_011080  3535770  3536651  +  882  ribosomal protein L11 methyltransferase  YP_002042638  normal  0.135295  decreased coverage  0.000138763  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3647  CDS  NC_011080  3536855  3537013  +  159  hypothetical protein  YP_002042639  normal  0.0447046  decreased coverage  0.000125765  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3649  CDS  NC_011080  3538303  3538599  +  297  DNA-binding protein Fis  YP_002042641  decreased coverage  0.0000862266  hitchhiker  0.00112277  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3650  CDS  NC_011080  3538685  3539569  +  885  putative methyltransferase  YP_002042642  decreased coverage  0.000365024  hitchhiker  0.00241657  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3684  CDS  NC_011080  3566333  3566953  -  621  30S ribosomal protein S4  YP_002042667  decreased coverage  0.00775419  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3685  CDS  NC_011080  3566987  3567376  -  390  30S ribosomal protein S11  YP_002042668  decreased coverage  0.00109954  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3697  CDS  NC_011080  3572177  3572716  -  540  50S ribosomal protein L5  YP_002042678  decreased coverage  0.000182939  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
-
 
SNSL254_A3698  CDS  NC_011080  3572731  3573045  -  315  50S ribosomal protein L24  YP_002042679  decreased coverage  0.000743122  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A3699  CDS  NC_011080  3573056  3573427  -  372  50S ribosomal protein L14  YP_002042680  decreased coverage  0.000119434  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A3709  CDS  NC_011080  3577574  3578203  -  630  50S ribosomal protein L3  YP_002042690  decreased coverage  0.000323926  normal  0.640658  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A3710  CDS  NC_011080  3578236  3578547  -  312  ribosomal protein S10  YP_002042691  decreased coverage  0.000120586  normal  0.692874  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A3740  CDS  NC_011080  3601777  3602340  -  564  para-aminobenzoate synthase component II  YP_002042720  normal  0.780045  decreased coverage  0.00646888  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A3858  CDS  NC_011080  3731624  3732820  -  1197  hypothetical protein  YP_002042834  decreased coverage  0.00469108  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A4001  CDS  NC_011080  3889100  3889897  -  798  lipopolysaccharide core biosynthesis protein  YP_002042971  decreased coverage  0.00922523  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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SNSL254_A4004  CDS  NC_011080  3892489  3893766  +  1278  3-deoxy-D-manno-octulosonic-acid transferase  YP_002042974  decreased coverage  0.00652138  normal  1  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria 
 
 
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