41 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
XfasM23_0086  CDS  NC_010577  117669  118712  1044  recombinase A  YP_001828817  decreased coverage  1.39683e-07  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0087  CDS  NC_010577  119200  121854  2655  alanyl-tRNA synthetase  YP_001828818  decreased coverage  0.000138455  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0122  CDS  NC_010577  164698  166227  1530  major facilitator transporter  YP_001828853  decreased coverage  0.00126713  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0290  CDS  NC_010577  374057  375211  1155  gamma-glutamyl kinase  YP_001829013  decreased coverage  2.40512e-05  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0306  CDS  NC_010577  390584  391435  852  palmitoyl-CoA hydrolase  YP_001829029  decreased coverage  0.000146303  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0460  CDS  NC_010577  551568  553088  1521  Mg chelatase, subunit ChlI  YP_001829181  decreased coverage  0.000368524  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0582  CDS  NC_010577  691132  691338  207  hypothetical protein  YP_001829300  decreased coverage  1.53426e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0583  CDS  NC_010577  691404  691613  210  hypothetical protein  YP_001829301  decreased coverage  1.51935e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0614  CDS  NC_010577  727339  727578  240  hypothetical protein  YP_001829332  decreased coverage  0.0030922  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0615  CDS  NC_010577  727638  728378  741  CutC family protein  YP_001829333  decreased coverage  0.0059352  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0617  CDS  NC_010577  728636  728932  297  hypothetical protein  YP_001829335  decreased coverage  0.00293184  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0779  CDS  NC_010577  917750  920077  2328  general secretion pathway protein D  YP_001829492  decreased coverage  0.00261901  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0961  CDS  NC_010577  1128408  1128761  354  hypothetical protein  YP_001829667  decreased coverage  9.29377e-09  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_0962  CDS  NC_010577  1128763  1129026  264  hypothetical protein  YP_001829668  decreased coverage  4.33911e-09  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1062  CDS  NC_010577  1214654  1214938  285  hypothetical protein  YP_001829764  decreased coverage  2.97723e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1079  CDS  NC_010577  1224003  1224767  765  UDP-3-O-(3-hydroxymyristoyl)-like protein  YP_001829781  decreased coverage  2.96016e-09  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1181  CDS  NC_010577  1322385  1322951  567  prophage antirepressor  YP_001829883  decreased coverage  3.54678e-11  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1182  CDS  NC_010577  1322948  1323334  387  hypothetical protein  YP_001829884  decreased coverage  2.19154e-09  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1320  CDS  NC_010577  1453615  1454001  387  hypothetical protein  YP_001830015  decreased coverage  0.00219631  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1469  CDS  NC_010577  1620898  1621395  498  adenylate cyclase  YP_001830154  decreased coverage  0.00690729  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1475  CDS  NC_010577  1626100  1627632  1533  polysaccharide biosynthesis protein  YP_001830160  decreased coverage  0.005815  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1519  CDS  NC_010577  1685989  1686939  951  4-hydroxy-3-methylbut-2-enyl diphosphate reductase  YP_001830201  decreased coverage  0.00815461  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1557  CDS  NC_010577  1731546  1732055  510  hypothetical protein  YP_001830239  decreased coverage  2.70169e-05  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1648  CDS  NC_010577  1826399  1827556  1158  hypothetical protein  YP_001830329  decreased coverage  0.00424749  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1909  CDS  NC_010577  2125224  2125880  657  OmpW family protein  YP_001830583  decreased coverage  1.71006e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1927  CDS  NC_010577  2148016  2150454  2439  Beta-N-acetylhexosaminidase  YP_001830601  decreased coverage  1.6014e-05  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1928  CDS  NC_010577  2150469  2153144  2676  glycoside hydrolase family protein  YP_001830602  decreased coverage  0.000726308  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_1965  CDS  NC_010577  2204347  2205582  1236  cell division protein FtsA  YP_001830638  decreased coverage  9.60191e-06  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2114  CDS  NC_010577  2384390  2385580  1191  elongation factor Tu  YP_001830786  decreased coverage  3.14964e-08  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2120  CDS  NC_010577  2390640  2391296  657  outer membrane lipoprotein LolB  YP_001830792  decreased coverage  2.99e-06  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2121  CDS  NC_010577  2391293  2392972  1680  TPR repeat-containing protein  YP_001830793  decreased coverage  9.63892e-05  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2123  CDS  NC_010577  2394315  2395400  1086  peptide chain release factor 1  YP_001830795  decreased coverage  0.000913582  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2195  CDS  NC_010577  2494532  2495425  894  hypothetical protein  YP_001830864  decreased coverage  0.00138486  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2263  CDS  NC_010579  35893  36252  360  single-strand binding protein  YP_001830969  decreased coverage  2.57141e-08  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2264  CDS  NC_010579  36370  36726  357  conjugal transfer protein TrbA  YP_001830970  decreased coverage  2.87063e-08  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2265  CDS  NC_010579  36930  37892  963  conjugal transfer ATPase TrbB  YP_001830971  decreased coverage  1.82151e-07  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_2266  CDS  NC_010579  37905  38297  393  conjugal transfer protein TrbC  YP_001830972  decreased coverage  1.54059e-08  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_R0006  rRNA  NC_010577  67887  70769  2883  23S ribosomal RNA    decreased coverage  0.00784205  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_R0052  tRNA  NC_010577  2385626  2385701  76  tRNA-Thr    decreased coverage  6.09044e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_R0053  tRNA  NC_010577  2385744  2385817  74  tRNA-Gly    decreased coverage  5.71258e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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XfasM23_R0054  tRNA  NC_010577  2385851  2385936  86  tRNA-Tyr    decreased coverage  7.56603e-10  n/a    Xylella fastidiosa M23  Bacteria 
 
 
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