32 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Pmob_0109  CDS  NC_010003  107152  107337  186  flagellar FlbD family protein  YP_001567181  decreased coverage  3.61803e-06  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0110  CDS  NC_010003  107407  108186  780  MotA/TolQ/ExbB proton channel  YP_001567182  decreased coverage  3.77193e-06  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0117  CDS  NC_010003  113619  115340  1722  ABC transporter related  YP_001567189  decreased coverage  0.00018995  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0362  CDS  NC_010003  388478  388642  165  ribosomal protein L33  YP_001567427  decreased coverage  5.78222e-08  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0428  CDS  NC_010003  462395  463963  1569  resolvase domain-containing protein  YP_001567491  decreased coverage  1.77151e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0583  CDS  NC_010003  634007  636010  2004  PpiC-type peptidyl-prolyl cis-trans isomerase  YP_001567640  decreased coverage  5.01806e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0636  CDS  NC_010003  685562  686626  1065  periplasmic binding protein/LacI transcriptional regulator  YP_001567690  decreased coverage  2.33808e-06  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0672  CDS  NC_010003  721007  721672  666  hypothetical protein  YP_001567725  decreased coverage  0.000653822  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0819  CDS  NC_010003  859915  860184  270  hypothetical protein  YP_001567866  decreased coverage  4.05513e-08  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0820  CDS  NC_010003  860225  861505  1281  carboxyl-terminal protease  YP_001567867  decreased coverage  1.70776e-06  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0829  CDS  NC_010003  873637  875700  2064  Beta-galactosidase  YP_001567876  decreased coverage  0.000309351  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0875  CDS  NC_010003  929593  930321  729  two component transcriptional regulator  YP_001567921  decreased coverage  0.000486966  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0926  CDS  NC_010003  979892  981496  1605  gamma-glutamyltransferase  YP_001567972  decreased coverage  9.76792e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_0927  CDS  NC_010003  981633  982166  534  hypothetical protein  YP_001567973  decreased coverage  0.00154914  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1011  CDS  NC_010003  1078867  1079124  258  acyl carrier protein  YP_001568056  decreased coverage  3.03772e-08  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1036  CDS  NC_010003  1102510  1102929  420  (3R)-hydroxymyristoyl-ACP dehydratase  YP_001568080  decreased coverage  0.00680293  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1037  CDS  NC_010003  1102935  1103783  849  degV family protein  YP_001568081  decreased coverage  0.00760689  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1111  CDS  NC_010003  1191923  1192606  684  cytochrome c biogenesis protein transmembrane region  YP_001568153  decreased coverage  1.99763e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1136  CDS  NC_010003  1216944  1218326  1383  hypothetical protein  YP_001568178  decreased coverage  0.000218716  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1325  CDS  NC_010003  1417530  1418738  1209  oligopeptide/dipeptide ABC transporter, ATPase subunit  YP_001568353  decreased coverage  1.61311e-06  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1326  CDS  NC_010003  1418757  1420520  1764  extracellular solute-binding protein  YP_001568354  decreased coverage  0.000186412  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1528  CDS  NC_010003  1651275  1652180  906  dihydrouridine synthase DuS  YP_001568552  decreased coverage  3.83307e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1529  CDS  NC_010003  1652766  1654472  1707  ABC transporter related  YP_001568553  decreased coverage  0.000802446  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1545  CDS  NC_010003  1677058  1678347  1290  citrate transporter  YP_001568569  decreased coverage  0.000185011  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1624  CDS  NC_010003  1778583  1779575  993  S-layer domain-containing protein  YP_001568641  decreased coverage  0.00805095  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1681  CDS  NC_010003  1838888  1840816  1929  hypothetical protein  YP_001568698  decreased coverage  3.10876e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1762  CDS  NC_010003  1928535  1929455  921  integrase family protein  YP_001568775  decreased coverage  0.00191766  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_1834  CDS  NC_010003  2018622  2020337  1716  diguanylate cyclase with PAS/PAC sensor  YP_001568846  decreased coverage  2.28382e-05  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_R0010  tRNA  NC_010003  388680  388766  87  tRNA-Tyr    decreased coverage  3.67926e-08  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_R0011  tRNA  NC_010003  388786  388861  76  tRNA-Thr    decreased coverage  3.12741e-08  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_R0050  tRNA  NC_010003  2018366  2018442  77  tRNA-Arg    decreased coverage  3.88549e-07  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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Pmob_R0051  tRNA  NC_010003  2018463  2018552  90  tRNA-Ser    decreased coverage  4.06758e-07  n/a    Petrotoga mobilis SJ95  Bacteria 
 
 
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