35 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
JJD26997_0008  CDS  NC_009707  13114  14805  1692  hypothetical protein  YP_001397281  decreased coverage  1.16352e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0009  CDS  NC_009707  14822  16267  1446  glutamate synthase subunit beta  YP_001397282  decreased coverage  2.90195e-09  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0145  CDS  NC_009707  140648  141532  885  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase  YP_001397391  decreased coverage  1.01722e-09  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0308  CDS  NC_009707  277632  277787  156  hypothetical protein  YP_001397524  decreased coverage  3.55374e-10  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0309  CDS  NC_009707  277798  278091  294  hypothetical protein  YP_001397525  decreased coverage  6.70775e-10  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0348  CDS  NC_009707  306690  307850  1161  hypothetical protein  YP_001397558  decreased coverage  1.79966e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0350  CDS  NC_009707  308286  310121  1836  hypothetical protein  YP_001397560  decreased coverage  1.88426e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0467  CDS  NC_009707  415435  415890  456  low molecular weight phosphotyrosine protein phosphatase family protein  YP_001397652  decreased coverage  1.18337e-09  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0509  CDS  NC_009707  453112  454749  1638  chaperonin GroEL  YP_001397688  decreased coverage  3.31966e-06  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0511  CDS  NC_009707  455193  457733  2541  hypothetical protein  YP_001397690  decreased coverage  1.90924e-06  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0761  CDS  NC_009707  685775  688363  2589  DNA gyrase subunit A  YP_001397894  decreased coverage  0.000813267  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0791  CDS  NC_009707  715364  715936  573  hypothetical protein  YP_001397921  decreased coverage  0.00338371  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0858    NC_009707  767600  767878  279      decreased coverage  1.40634e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0859  CDS  NC_009707  768040  768465  426  hypothetical protein  YP_001397981  decreased coverage  1.67391e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0860  CDS  NC_009707  768465  768617  153  hypothetical protein  YP_001397982  decreased coverage  9.24855e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0861  CDS  NC_009707  768717  768989  273  hypothetical protein  YP_001397983  decreased coverage  1.35846e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0862  CDS  NC_009707  768992  769354  363  hypothetical protein  YP_001397984  decreased coverage  1.82084e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0902  CDS  NC_009707  801217  802116  900  cysteine synthase A  YP_001398018  decreased coverage  3.6612e-10  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0926  CDS  NC_009707  824881  826377  1497  F-box only protein 18  YP_001398040  decreased coverage  0.0098755  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_0927  CDS  NC_009707  826352  827167  816  hypothetical protein  YP_001398041  decreased coverage  0.00211543  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1015    NC_009707  894823  895152  330      decreased coverage  3.09146e-05  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1063  CDS  NC_009707  935681  937606  1926  macrolide-specific efflux protein macB  YP_001398156  decreased coverage  0.00606621  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1114  CDS  NC_009707  979261  979389  129  hypothetical protein  YP_001398199  decreased coverage  1.79726e-11  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1115  CDS  NC_009707  979361  979537  177  hypothetical protein  YP_001398200  decreased coverage  1.94256e-11  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1311  CDS  NC_009707  1156522  1157904  1383  cell division protein FtsA  YP_001398360  decreased coverage  2.93217e-05  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1465  CDS  NC_009707  1303037  1304236  1200  elongation factor Tu  YP_001398493  decreased coverage  1.11535e-06  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1466  tRNA  NC_009707  1304305  1304379  75  tRNA-Thr    decreased coverage  8.57792e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1468  tRNA  NC_009707  1304569  1304654  86  tRNA-Tyr    decreased coverage  8.29322e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1469  tRNA  NC_009707  1304704  1304779  76  tRNA-Thr    decreased coverage  5.98832e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1470  CDS  NC_009707  1304894  1305631  738  amino acid ABC transporter, ATP-binding protein  YP_001398494  decreased coverage  8.37617e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1648  CDS  NC_009707  1458239  1459006  768  HAD family hydrolase  YP_001398638  decreased coverage  3.08213e-08  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1826  CDS  NC_009707  1608403  1608792  390  30S ribosomal protein S9  YP_001398780  decreased coverage  6.06063e-05  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1921  CDS  NC_009707  1697583  1698101  519  NADH dehydrogenase subunit J  YP_001398852  decreased coverage  5.42354e-05  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_1922  CDS  NC_009707  1698098  1698739  642  NADH dehydrogenase subunit I  YP_001398853  decreased coverage  0.000283263  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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JJD26997_2039  tRNA  NC_009707  1790903  1790979  77  tRNA-Arg    decreased coverage  3.59807e-07  n/a    Campylobacter jejuni subsp. doylei 269.97  Bacteria 
 
 
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