26 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Mthe_0055  CDS  NC_008553  49689  50306  618  gas vesicle synthesis GvpLGvpF  YP_842497  decreased coverage  0.00610804  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0056  CDS  NC_008553  50355  50627  273  gas vesicle synthesis family protein  YP_842498  decreased coverage  0.00544654  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0149  CDS  NC_008553  136744  140085  3342  S-layer-like domain-containing protein  YP_842589  decreased coverage  0.00285183  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0316  CDS  NC_008553  315923  316945  1023  hypothetical protein  YP_842751  decreased coverage  0.000114792  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0436  CDS  NC_008553  450381  450548  168  CopG/Arc/MetJ family transcriptional regulator  YP_842868  decreased coverage  6.44308e-08  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0437  CDS  NC_008553  450545  450907  363  putative 6-pyruvoyl tetrahydropterin synthase  YP_842869  decreased coverage  1.65421e-07  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0452  CDS  NC_008553  468225  468947  723  5-carboxymethyl-2-hydroxymuconate delta-isomerase  YP_842883  decreased coverage  0.00365072  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0509  CDS  NC_008553  520069  521160  1092  hypothetical protein  YP_842940  decreased coverage  1.659e-05  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0544  CDS  NC_008553  564637  565377  741  UBA/THIF-type NAD/FAD binding protein  YP_842975  decreased coverage  3.53659e-05  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0572  CDS  NC_008553  591871  593175  1305  methyl-coenzyme M reductase, beta subunit  YP_843003  decreased coverage  0.000106932  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0586  CDS  NC_008553  606360  607220  861  hypothetical protein  YP_843017  decreased coverage  4.73168e-08  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0587  CDS  NC_008553  607217  607909  693  ABC transporter related  YP_843018  decreased coverage  2.00317e-08  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0588  CDS  NC_008553  608662  609105  444  hypothetical protein  YP_843019  decreased coverage  8.31511e-09  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0638  CDS  NC_008553  664105  665961  1857  CRISPR-associated Csh1 family protein  YP_843068  decreased coverage  0.0097245  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0639  CDS  NC_008553  665958  666923  966  CRISPR-associated Csh2 family protein  YP_843069  decreased coverage  0.00285412  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0722  CDS  NC_008553  762390  763706  1317  DNA primase  YP_843152  decreased coverage  0.000789623  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0834  CDS  NC_008553  896844  900452  3609  periplasmic component of the Tol biopolymer transport system-like  YP_843263  decreased coverage  0.00874286  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0836  CDS  NC_008553  904278  905471  1194  periplasmic binding protein  YP_843265  decreased coverage  0.00603144  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0906  CDS  NC_008553  985953  986315  363  hypothetical protein  YP_843334  decreased coverage  0.000104891  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_0907  CDS  NC_008553  986376  986867  492  rubredoxin-type Fe(Cys)4 protein  YP_843335  decreased coverage  5.83503e-05  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_1132  CDS  NC_008553  1217934  1218920  987  hypothetical protein  YP_843555  decreased coverage  0.00888  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_1277  CDS  NC_008553  1384212  1385564  1353  tryptophan synthase subunit beta  YP_843695  decreased coverage  6.82618e-07  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_1293  CDS  NC_008553  1399750  1400133  384  30S ribosomal protein S8e  YP_843711  decreased coverage  2.73371e-08  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_1554    NC_008553  1687294  1690259  2966      decreased coverage  0.00378338  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_1555  CDS  NC_008553  1690256  1691245  990  hypothetical protein  YP_843965  decreased coverage  0.00565642  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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Mthe_1723  CDS  NC_008553  1869812  1870270  459  ribosomal protein L22  YP_844129  decreased coverage  4.43469e-06  n/a    Methanosaeta thermophila PT  Archaea 
 
 
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