14 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Hhal_0292  CDS  NC_008789  327197  328423  1227  hypothetical protein  YP_001001888  decreased coverage  8.62932e-05  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_0322  CDS  NC_008789  363587  364726  1140  phage integrase family protein  YP_001001918  decreased coverage  0.00211784  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_0350  CDS  NC_008789  404843  406978  2136  ATP-dependent DNA helicase DinG  YP_001001946  decreased coverage  0.00468076  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_0453  CDS  NC_008789  518230  518634  405  biopolymer transport protein ExbD/TolR  YP_001002043  decreased coverage  0.00775346  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_0799  CDS  NC_008789  879860  881257  1398  O-antigen polymerase  YP_001002377  decreased coverage  0.00494175  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_0931  CDS  NC_008789  1008238  1008699  462  hypothetical protein  YP_001002509  decreased coverage  0.000784507  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1048  CDS  NC_008789  1134147  1134827  681  ribulose-phosphate 3-epimerase  YP_001002626  decreased coverage  4.83627e-05  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1049  CDS  NC_008789  1134875  1135762  888  phosphoribulokinase  YP_001002627  decreased coverage  3.81881e-05  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1310  CDS  NC_008789  1420396  1420998  603  hypothetical protein  YP_001002879  decreased coverage  0.00821356  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1520  CDS  NC_008789  1647660  1648658  999  hypothetical protein  YP_001003089  decreased coverage  0.00579805  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1679  CDS  NC_008789  1831992  1833764  1773  DNA polymerase III alpha subunit-like protein  YP_001003245  decreased coverage  0.0065962  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1819  CDS  NC_008789  1992514  1993698  1185  4-coumarate--CoA ligase  YP_001003385  decreased coverage  0.0064272  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_1928  CDS  NC_008789  2124217  2126247  2031  TonB-dependent receptor  YP_001003494  decreased coverage  0.00435524  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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Hhal_2000  CDS  NC_008789  2204773  2206356  1584  phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase  YP_001003566  decreased coverage  0.00113973  n/a    Halorhodospira halophila SL1  Bacteria 
 
 
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