37 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Bcen2424_0187  CDS  NC_008542  209831  210478  +  648  hypothetical protein  YP_833834  decreased coverage  0.000000277575  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0258  CDS  NC_008542  297951  299930  +  1980  methyl-accepting chemotaxis sensory transducer  YP_833905  decreased coverage  0.00414638  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0259  CDS  NC_008542  299934  300926  +  993  MCP methyltransferase, CheR-type  YP_833906  decreased coverage  0.000294494  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0333  CDS  NC_008542  384595  385785  +  1191  elongation factor Tu  YP_833980  decreased coverage  0.0000426715  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0349  CDS  NC_008542  406430  407050  +  621  50S ribosomal protein L4  YP_833996  decreased coverage  0.0000000688148  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0350  CDS  NC_008542  407047  407361  +  315  50S ribosomal protein L23  YP_833997  decreased coverage  0.0000000162065  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0468  CDS  NC_008542  519211  520701  +  1491  hypothetical protein  YP_834115  decreased coverage  0.0000282714  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0469  CDS  NC_008542  520772  521275  +  504  hypothetical protein  YP_834116  decreased coverage  0.00000529011  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0564  CDS  NC_008542  634943  636139  +  1197  cell division protein FtsZ  YP_834211  decreased coverage  0.0000000183043  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0797  CDS  NC_008542  899877  900227  +  351  XRE family transcriptional regulator  YP_834443  decreased coverage  0.0000538753  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_0859  CDS  NC_008542  963839  964132  +  294  co-chaperonin GroES  YP_834505  decreased coverage  0.00336057  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1005  CDS  NC_008542  1112766  1112969  +  204  cold-shock DNA-binding domain-containing protein  YP_834651  decreased coverage  0.000000000138361  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1006  CDS  NC_008542  1113111  1114238  +  1128  DNA polymerase III, epsilon subunit  YP_834652  decreased coverage  0.0000000140116  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1110  CDS  NC_008542  1221527  1224706  -  3180  ribonuclease  YP_834756  decreased coverage  0.000270139  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1269  CDS  NC_008542  1400013  1401659  +  1647  hypothetical protein  YP_834914  decreased coverage  0.0070497  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1374  CDS  NC_008542  1512153  1512758  +  606  CDP-alcohol phosphatidyltransferase  YP_835019  decreased coverage  0.0055276  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1517  CDS  NC_008542  1679681  1679851  +  171  Flp/Fap pilin component  YP_835162  decreased coverage  0.00000000000857927  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1518  CDS  NC_008542  1679939  1680433  +  495  peptidase A24A, prepilin type IV  YP_835163  decreased coverage  0.0000000000376133  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1572  CDS  NC_008542  1734881  1735693  +  813  curculin domain-containing protein  YP_835217  decreased coverage  0.00000000136518  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1675  CDS  NC_008542  1862306  1863691  +  1386  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  YP_835320  decreased coverage  0.00830094  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1831  CDS  NC_008542  2033771  2035327  +  1557  major facilitator transporter  YP_835475  decreased coverage  0.0091449  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_1947  CDS  NC_008542  2165244  2165678  +  435  hypothetical protein  YP_835591  decreased coverage  0.00296399  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2080  CDS  NC_008542  2310676  2311251  +  576  peptidylprolyl isomerase  YP_835724  decreased coverage  0.00394174  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2084  CDS  NC_008542  2313787  2314656  -  870  RNA methyltransferase  YP_835728  decreased coverage  0.00462385  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2249  CDS  NC_008542  2503797  2504156  -  360  NADH dehydrogenase subunit A  YP_835893  decreased coverage  0.00000217772  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2250  CDS  NC_008542  2504505  2504882  -  378  preprotein translocase subunit SecG  YP_835894  decreased coverage  0.00000247894  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2422  CDS  NC_008542  2685920  2687146  +  1227  alpha/beta hydrolase fold  YP_836065  decreased coverage  0.00445003  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2540  CDS  NC_008542  2816499  2817023  -  525  hypothetical protein  YP_836183  decreased coverage  0.0000584092  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2656  CDS  NC_008542  2943843  2944817  -  975  LysR family transcriptional regulator  YP_836299  decreased coverage  0.00719303  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2700  CDS  NC_008542  2989505  2990995  -  1491  TPR repeat-containing protein  YP_836343  decreased coverage  0.00571929  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2801  CDS  NC_008542  3097851  3098732  +  882  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase  YP_836444  decreased coverage  0.000812643  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2952  CDS  NC_008542  3264318  3265238  +  921  LysR family transcriptional regulator  YP_836593  decreased coverage  0.00119284  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_2953  CDS  NC_008542  3265260  3267485  -  2226  aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding  YP_836594  decreased coverage  0.000980492  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_3066  CDS  NC_008542  3380313  3380996  +  684  flagellar assembly protein H  YP_836707  decreased coverage  0.00102567  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_R0011  tRNA  NC_008542  384229  384314  +  86  tRNA-Tyr    decreased coverage  0.000000561505  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_R0013  tRNA  NC_008542  384454  384528  +  75  tRNA-Thr    decreased coverage  0.000000441208  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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Bcen2424_R0042  tRNA  NC_008542  1709611  1709697  -  87  tRNA-Leu    decreased coverage  0.00146649  n/a    Burkholderia cenocepacia HI2424  Bacteria 
 
 
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