19 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
PICST_32630  CDS  NC_009046  274767  276587  +  1821  predicted protein  XP_001385391  decreased coverage  0.000222385  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_32634  CDS  NC_009046  281772  283595  +  1824  multidrug-resistance transporte  XP_001385394  decreased coverage  0.0035637  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_32690  CDS  NC_009046  408113  408781  +  669  Vacuolar sorting protein SNF7 (Vacuolar protein sorting-associated protein VPS32)  XP_001385432  decreased coverage  0.00479925  normal  0.0750139  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_32879  CDS  NC_009046  852198  854054  -  1857  predicted protein  XP_001385862  normal  0.134484  decreased coverage  0.00551311  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_32922  CDS  NC_009046  971788  973050  +  1263  predicted protein  XP_001385547  decreased coverage  0.0082388  normal  0.91244  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_32931  CDS  NC_009046  1005397  1006272  +  876  predicted protein  XP_001385549  decreased coverage  0.00295624  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_32979  CDS  NC_009046  1128647  1129840  +  1194  predicted protein  XP_001385570  normal  0.116223  decreased coverage  0.00804047  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_36549  CDS  NC_009046  247421  250528  +  3108  Translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins  XP_001385385  normal  0.346459  decreased coverage  0.00970244  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_48821  CDS  NC_009046  930683  931483  -  801  predicted protein  XP_001385871  decreased coverage  0.00127282  normal  0.146555  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_48947  CDS  NC_009046  836660  838918  +  2259  predicted protein  XP_001385524  normal  1  decreased coverage  0.00599657  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_49015  CDS  NC_009046  336822  337100  +  279  predicted protein  XP_001385409  normal  0.205612  decreased coverage  0.0032819  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_61325  CDS  NC_009046  839135  840175  +  1041  3-keto-steroid reductase  XP_001385525  normal  0.406154  decreased coverage  0.00397596  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_61419  CDS  NC_009046  1004090  1005073  +  984  predicted protein  XP_001385548  decreased coverage  0.00456855  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_61692  CDS  NC_009046  337312  338136  -  825  predicted protein  XP_001385752  normal  0.320803  decreased coverage  0.00450301  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_61948  CDS  NC_009046  829742  836245  +  6504  predicted protein  XP_001385523  normal  0.982611  decreased coverage  0.00785826  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_65985  CDS  NC_009046  1370936  1372993  +  2058  predicted protein  XP_001385615  decreased coverage  0.00221694  normal  0.861424  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_78783  CDS  NC_009046  1293857  1295883  -  2027  vacuolar protease B  XP_001385945  decreased coverage  0.0089514  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_84718  CDS  NC_009046  1141080  1142639  +  1560  3-isopropylmalate dehydratase  XP_001385573  decreased coverage  0.00000783625  normal  0.0902341  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_90675  CDS  NC_009046  258163  262014  +  3852  predicted protein  XP_001385388  normal  0.621061  decreased coverage  0.00727478  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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