38 decreased-coverage genes were found for selected organism/s



Page 1 of 1    << first  < prev  1  next >  last >>   


Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
BMA10247_0029  CDS  NC_009080  27904  28527  624  hypothetical protein  YP_001079609  decreased coverage  0.0034848  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0091  CDS  NC_009080  89838  91280  1443  mannitol dehydrogenase family protein  YP_001079670  decreased coverage  0.000701131  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0106  CDS  NC_009080  105726  106946  1221  cyclopropane-fatty-acyl-phospholipid synthase  YP_001079685  decreased coverage  3.08019e-05  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0107  CDS  NC_009080  107078  107722  645  pyridoxamine 5'-phosphate oxidase  YP_001079686  decreased coverage  2.3808e-05  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0276  CDS  NC_009080  264577  265473  897  LysR family transcriptional regulator  YP_001079851  decreased coverage  0.000191888  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0360  CDS  NC_009080  349271  349921  651  uracil phosphoribosyltransferase  YP_001079935  decreased coverage  0.00755742  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0467  CDS  NC_009080  452129  453493  1365  amino acid transporter  YP_001080037  decreased coverage  0.00613549  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0820  CDS  NC_009080  792580  793410  831  ABC transporter, ATP-binding protein  YP_001080383  decreased coverage  0.0049646  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0821  CDS  NC_009080  793437  794378  942  permease  YP_001080384  decreased coverage  0.00555891  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0866  CDS  NC_009080  832321  833322  1002  putative syringomycin biosynthesis enzyme  YP_001080429  decreased coverage  0.00835773  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0867  CDS  NC_009080  833360  834250  891  iron chelate ABC transporter ATP-binding protein  YP_001080430  decreased coverage  0.00729105  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0886  CDS  NC_009080  874542  874775  234  hypothetical protein  YP_001080450  decreased coverage  0.00333063  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0887  CDS  NC_009080  873953  874576  624  hypothetical protein  YP_001080449  decreased coverage  0.00821077  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_0960  CDS  NC_009080  943460  945697  2238  GTP pyrophosphokinase  YP_001080522  decreased coverage  0.00215739  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1039  CDS  NC_009080  1030990  1031703  714  hypothetical protein  YP_001080594  decreased coverage  1.38687e-05  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1086  CDS  NC_009080  1081278  1083536  2259  putative ATP-dependent helicase  YP_001080640  decreased coverage  0.00956322  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1171  CDS  NC_009080  1162093  1162992  900  Ser/Thr protein phosphatase family protein  YP_001080725  decreased coverage  0.0049646  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1255  CDS  NC_009080  1239277  1239825  549  anti-oxidant AhpCTSA family protein  YP_001080806  decreased coverage  0.000257596  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1352  CDS  NC_009080  1337955  1338764  810  phosphomethylpyrimidine kinase  YP_001080903  decreased coverage  0.00443333  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1355  CDS  NC_009080  1340113  1341480  1368  uracil-DNA glycosylase  YP_001080906  decreased coverage  0.00548958  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1623  CDS  NC_009080  1620377  1621252  876  segregation and condensation protein A  YP_001081167  decreased coverage  0.000113336  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1777  tRNA  NC_009080  1763689  1763764  76  tRNA-Gly    decreased coverage  0.00314954  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1816  CDS  NC_009080  1800579  1801202  624  molybdopterin-guanine dinucleotide biosynthesis protein MobA  YP_001081355  decreased coverage  0.00783295  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_1914  CDS  NC_009080  1894499  1895479  981  LysR family transcriptional regulator  YP_001081451  decreased coverage  1.21317e-06  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_2322  CDS  NC_009080  2284842  2285258  417  glyoxalase family protein  YP_001081850  decreased coverage  1.00252e-07  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_2323  CDS  NC_009080  2285660  2286754  1095  ADA regulatory protein  YP_001081851  decreased coverage  1.61007e-06  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_2628  CDS  NC_009080  2595830  2596348  519  thermoresistant gluconokinase  YP_001082153  decreased coverage  0.0043609  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_2932  CDS  NC_009080  2890254  2891135  882  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase  YP_001082452  decreased coverage  4.17755e-05  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_3460  tRNA  NC_009080  3407695  3407769  75  tRNA-Thr    decreased coverage  6.10299e-05  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_3461  CDS  NC_009080  3407832  3409022  1191  elongation factor Tu  YP_001082974  decreased coverage  0.000474832  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A0080  CDS  NC_009079  67396  67527  132  hypothetical protein  YP_001077287  decreased coverage  2.08517e-07  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A0081    NC_009079  67672  67971  300      decreased coverage  4.4091e-07  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A0202    NC_009079  172989  174152  1164      decreased coverage  0.00497899  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A0310  CDS  NC_009079  270764  271651  888  hypothetical protein  YP_001077515  decreased coverage  0.000292175  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A0979  CDS  NC_009079  925877  926692  816  L-aspartate dehydrogenase  YP_001078171  decreased coverage  0.00837942  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A1832  CDS  NC_009079  1763191  1764423  1233  putative purine catabolism transcriptional regulator  YP_001079014  decreased coverage  0.00249141  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A1979  CDS  NC_009079  1905872  1907146  1275  serine hydroxymethyltransferase  YP_001079155  decreased coverage  0.00954911  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
BMA10247_A2041  CDS  NC_009079  1979601  1981034  1434  hypothetical protein  YP_001079216  decreased coverage  0.00170326  n/a    Burkholderia mallei NCTC 10247  Bacteria 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>