26 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
BMASAVP1_A0649  CDS  NC_008785  662275  663729  1455  major facilitator family transporter  YP_991995  decreased coverage  0.0060403  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A0942  CDS  NC_008785  938802  939575  774  hydrophobic amino acid ABC transporter ATP-binding protein  YP_992282  decreased coverage  0.00114272  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1194  CDS  NC_008785  1179841  1180749  909  hypothetical protein  YP_992529  decreased coverage  0.00865316  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1265  CDS  NC_008785  1241414  1242295  882  hypothetical protein  YP_992600  decreased coverage  0.00885366  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1266  CDS  NC_008785  1242673  1242909  237  glutathione S-transferase  YP_992601  decreased coverage  0.00947497  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1560  CDS  NC_008785  1534500  1535333  834  IS407A, transposase OrfB  YP_992886  decreased coverage  6.77585e-08  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1561  CDS  NC_008785  1535344  1535880  537  putative histidinol-phosphate aminotransferase  YP_992887  decreased coverage  3.26314e-09  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1596  CDS  NC_008785  1570483  1571667  1185  major facilitator family transporter  YP_992922  decreased coverage  0.00474308  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1597  CDS  NC_008785  1571787  1573352  1566  fenI protein  YP_992923  decreased coverage  0.0010634  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1598  CDS  NC_008785  1573431  1574156  726  precorrin-4 C11-methyltransferase  YP_992924  decreased coverage  0.00151458  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1770  CDS  NC_008785  1752474  1753865  1392  sigma-54 dependent transcriptional regulator  YP_993090  decreased coverage  0.000204714  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1982  CDS  NC_008785  1959800  1960348  549  anti-oxidant AhpCTSA family protein  YP_993298  decreased coverage  0.00461398  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2039  CDS  NC_008785  2012877  2013692  816  hypothetical protein  YP_993355  decreased coverage  1.06552e-06  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2316  CDS  NC_008785  2320381  2321976  1596  cobyric acid synthase  YP_993625  decreased coverage  0.0037254  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2334  CDS  NC_008785  2338465  2340138  1674  dihydroxy-acid dehydratase  YP_993643  decreased coverage  0.00290796  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2434  CDS  NC_008785  2428207  2429355  1149  putative amino acid ABC transporter, periplasmic amino acid-binding protein  YP_993739  decreased coverage  0.00891241  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2490  CDS  NC_008785  2475958  2476965  1008  RluA family pseudouridine synthase  YP_993794  decreased coverage  1.51813e-06  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2503  CDS  NC_008785  2491765  2492022  258  ferredoxin  YP_993807  decreased coverage  4.52396e-13  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2504  tRNA  NC_008785  2492131  2492206  76  tRNA-Asn    decreased coverage  2.20613e-13  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3168  CDS  NC_008785  3132758  3133378  621  50S ribosomal protein L4  YP_994455  decreased coverage  4.73803e-11  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3169  CDS  NC_008785  3133378  3134037  660  50S ribosomal protein L3  YP_994456  decreased coverage  2.63976e-12  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3184  CDS  NC_008785  3154540  3154920  381  preprotein translocase subunit SecE  YP_994471  decreased coverage  1.13463e-06  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3186  CDS  NC_008785  3155098  3156288  1191  elongation factor Tu  YP_994472  decreased coverage  4.68547e-06  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3208  CDS  NC_008785  3172786  3174018  1233  deoxyguanosinetriphosphate triphosphohydrolase-like protein  YP_994491  decreased coverage  0.00852958  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3400  CDS  NC_008785  3366059  3366703  645  metallo-beta-lactamase family protein  YP_994679  decreased coverage  0.00696268  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3452  CDS  NC_008785  3417783  3418931  1149  aminotransferase  YP_994730  decreased coverage  0.00530807  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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