24 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
BURPS668_0564  CDS  NC_009074  535904  536404  501  phosphopantetheine adenylyltransferase  YP_001057617  decreased coverage  0.00247535  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_0570  tRNA  NC_009074  540563  540639  77  tRNA-Gln    decreased coverage  0.000532927  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_0571  CDS  NC_009074  540693  541574  882  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase  YP_001057623  decreased coverage  0.000369391  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_0768  CDS  NC_009074  746007  747455  1449  cytochrome c family protein  YP_001057820  decreased coverage  0.00254  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_0769  CDS  NC_009074  747446  748087  642  hypothetical protein  YP_001057821  decreased coverage  0.00282822  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_0986  CDS  NC_009074  964528  965244  717  hydrophobic amino acid ABC transporter ATP-binding protein  YP_001058037  decreased coverage  0.0000000350992  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_1025  CDS  NC_009074  998546  999007  462  hypothetical protein  YP_001058075  decreased coverage  0.000631398  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_1634  CDS  NC_009074  1600747  1600986  240  hypothetical protein  YP_001058675  decreased coverage  0.0078809  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_1742  CDS  NC_009074  1717576  1718484  909  tRNA pseudouridine synthase B  YP_001058781  decreased coverage  0.00438072  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_1777  CDS  NC_009074  1754688  1755401  714  hypothetical protein  YP_001058816  decreased coverage  0.00000000195228  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_1908  CDS  NC_009074  1869896  1871503  1608  carbohydrate ABC transporter ATP-binding protein  YP_001058943  decreased coverage  0.00738158  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_2321  CDS  NC_009074  2299775  2302192  2418  ATP-dependent protease La  YP_001059354  decreased coverage  0.00784653  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_2802  CDS  NC_009074  2766102  2769368  3267  ribonuclease E  YP_001059823  decreased coverage  0.0000361809  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_2803  CDS  NC_009074  2769487  2770620  1134  molybdenum cofactor biosynthesis protein A  YP_001059824  decreased coverage  0.000449435  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_2814  CDS  NC_009074  2780033  2780356  324  ferredoxin  YP_001059835  decreased coverage  0.0000000000081194  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_2816  tRNA  NC_009074  2780630  2780705  76  tRNA-Asn    decreased coverage  0.00000000000213443  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_2983  CDS  NC_009074  2928809  2929228  420  hypothetical protein  YP_001059997  decreased coverage  0.00581443  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3054  CDS  NC_009074  2997692  3000337  2646  hypothetical protein  YP_001060067  decreased coverage  0.00156029  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3167  CDS  NC_009074  3107013  3107993  981  LysR family transcriptional regulator  YP_001060179  decreased coverage  0.000000000529291  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3379  CDS  NC_009074  3313079  3313243  165  hypothetical protein  YP_001060390  decreased coverage  0.0000000000127924  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3640  CDS  NC_009074  3565501  3566286  786  hypothetical protein  YP_001060645  decreased coverage  0.00234142  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3699  CDS  NC_009074  3622034  3623113  1080  3-dehydroquinate synthase  YP_001060703  decreased coverage  0.00532697  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3762  CDS  NC_009074  3677670  3678860  1191  elongation factor Tu  YP_001060765  decreased coverage  0.000000000163409  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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BURPS668_3914  CDS  NC_009074  3812591  3812890  300  hypothetical protein  YP_001060908  decreased coverage  0.0000000613286  n/a    Burkholderia pseudomallei 668  Bacteria 
 
 
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