43 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
BURPS1710b_1084  CDS  NC_007434  1137800  1139332  1533  exodeoxyribonuclease VII large subunit  YP_332496  decreased coverage  0.00935981  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1086  CDS  NC_007434  1140543  1141811  1269  putative lipoprotein  YP_332498  decreased coverage  0.00615627  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1146  CDS  NC_007434  1194825  1195541  717  branched-chain amino acid ABC transporter, ATP-binding protein  YP_332558  decreased coverage  0.000313887  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1147  CDS  NC_007434  1195586  1196512  927  hypothetical protein  YP_332560  decreased coverage  0.00273813  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1148  CDS  NC_007434  1195448  1197043  1596  hypothetical protein  YP_332559  decreased coverage  0.00580188  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1331  CDS  NC_007434  1397430  1398383  954  ATPase, AAA family protein  YP_332741  decreased coverage  0.00666024  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1332  CDS  NC_007434  1398506  1398865  360  cytochrome c, class IC  YP_332742  decreased coverage  0.0014287  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1333  CDS  NC_007434  1398906  1399274  369  cytochrome c family protein  YP_332743  decreased coverage  0.00326957  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1774  CDS  NC_007434  1930809  1931840  1032  hypothetical protein  YP_333175  decreased coverage  0.000428291  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1813  CDS  NC_007434  1976273  1976530  258  putative osmosis-related lipoprotein  YP_333214  decreased coverage  0.00302941  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1814  CDS  NC_007434  1976859  1978493  1635  CAIB/BAIF family protein  YP_333215  decreased coverage  0.00543882  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1954  CDS  NC_007434  2126386  2127036  651  Hfq protein  YP_333353  decreased coverage  6.04734e-09  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1955  CDS  NC_007434  2127341  2127613  273  hypothetical protein  YP_333354  decreased coverage  2.52665e-09  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_1956  CDS  NC_007434  2127776  2128747  972  hypothetical protein  YP_333355  decreased coverage  1.13781e-08  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2048  CDS  NC_007434  2214481  2215491  1011  hypothetical protein  YP_333443  decreased coverage  0.00753525  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2149  CDS  NC_007434  2352965  2353957  993  putative histidinol-phosphate aminotransferase  YP_333544  decreased coverage  0.000106616  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2150  CDS  NC_007434  2353967  2355067  1101  hypothetical protein  YP_333545  decreased coverage  0.000142113  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2212  CDS  NC_007434  2470869  2471183  315  NIPSNAP family protein  YP_333607  decreased coverage  0.00220241  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2213  CDS  NC_007434  2471253  2472725  1473  aldehyde dehydrogenase  YP_333608  decreased coverage  0.00475065  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2235  CDS  NC_007434  2500974  2502257  1284  polyhydroxyalkanoate depolymerase domain-containing protein  YP_333630  decreased coverage  0.00861555  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_2690  CDS  NC_007434  2983584  2983856  273  hypothetical protein  YP_334076  decreased coverage  0.00833871  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_3298  CDS  NC_007434  3609307  3610830  1524  WcbE  YP_334669  decreased coverage  0.00149764  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_3655  CDS  NC_007434  3981844  3984579  2736  Type III restriction-modification enzyme helicase subunit  YP_335020  decreased coverage  3.24142e-06  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_3742  CDS  NC_007434  4080368  4082524  2157  ResB-like family protein  YP_335107  decreased coverage  0.00865077  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_3775  CDS  NC_007434  4100929  4101549  621  50S ribosomal protein L4  YP_335139  decreased coverage  7.98525e-09  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0074  CDS  NC_007435  98105  100858  2754  FtsH-2 protease  YP_335233  decreased coverage  0.00600041  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0170  CDS  NC_007435  239795  240478  684  transposase B  YP_335329  decreased coverage  0.000123124  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0171  CDS  NC_007435  241315  242073  759  hypothetical protein  YP_335330  decreased coverage  0.000176757  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0199  CDS  NC_007435  302814  303560  747  hypothetical protein  YP_335358  decreased coverage  0.0026614  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0423  CDS  NC_007435  590084  590953  870  type III secretion system protein HrpB  YP_335582  decreased coverage  0.00673327  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0587  CDS  NC_007435  780303  780929  627  type III secretion system transcriptional regulator BsaN  YP_335746  decreased coverage  1.13991e-05  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0588  CDS  NC_007435  780904  781176  273  hypothetical protein  YP_335747  decreased coverage  6.04173e-06  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0589  CDS  NC_007435  781455  782741  1287  type III secretion system protein PrgH/EprH  YP_335748  decreased coverage  3.77732e-05  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0620  CDS  NC_007435  813641  814402  762  permease component of taurine ABC transporter  YP_335779  decreased coverage  0.00192231  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0621  CDS  NC_007435  814495  815277  783  taurine ABC transporter, ATP-binding protein  YP_335780  decreased coverage  0.00429609  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0780  CDS  NC_007435  1027927  1028874  948  hypothetical protein  YP_335939  decreased coverage  6.14053e-07  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0781  CDS  NC_007435  1028976  1029131  156  hypothetical protein  YP_335940  decreased coverage  1.28993e-07  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A0783  CDS  NC_007435  1030282  1033005  2724  2-oxoacid dehydrogenase subunit E1  YP_335942  decreased coverage  1.78151e-05  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A2094  CDS  NC_007435  2550404  2551303  900  rhamnosyltransferase 1, subunit A  YP_337245  decreased coverage  9.39579e-09  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A2145  CDS  NC_007435  2609995  2611449  1455  salicylate biosynthesis isochorismate synthase  YP_337296  decreased coverage  0.00728668  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A2146  CDS  NC_007435  2611446  2611751  306  isochorismate-pyruvate lyase  YP_337297  decreased coverage  0.00415541  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A2223  CDS  NC_007435  2708460  2710217  1758  serine-type carboxypeptidase family protein  YP_337374  decreased coverage  0.00580188  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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BURPS1710b_A2226  CDS  NC_007435  2715361  2715642  282  transposase  YP_337377  decreased coverage  0.000869516  n/a    Burkholderia pseudomallei 1710b  Bacteria 
 
 
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