59 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Adeh_0130  CDS  NC_007760  153142  153669  528  hypothetical protein  YP_463344  decreased coverage  0.00621734  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0217  CDS  NC_007760  243740  244801  1062  serine/threonine protein kinase  YP_463431  decreased coverage  0.00807707  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0296  CDS  NC_007760  344867  345460  594  tRNA-(MS(2)IO(6)A)-hydroxylase-like  YP_463509  decreased coverage  0.00711968  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0614  CDS  NC_007760  708021  709046  1026  response regulator receiver (CheY-like) modulated CheB methylesterase  YP_463827  decreased coverage  0.00621124  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0708  CDS  NC_007760  823327  823845  519  hypothetical protein  YP_463921  decreased coverage  0.00451486  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0737  CDS  NC_007760  857268  858560  1293  hypothetical protein  YP_463949  decreased coverage  0.000826338  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0779  CDS  NC_007760  897425  898552  1128  hypothetical protein  YP_463991  decreased coverage  0.00353423  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_0780  CDS  NC_007760  898640  899788  1149  methyltransferase  YP_463992  decreased coverage  0.00897963  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1204  CDS  NC_007760  1395549  1396178  630  V-type ATPase, D subunit  YP_464415  decreased coverage  0.00302283  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1216  CDS  NC_007760  1408681  1409019  339  putative ferredoxin  YP_464427  decreased coverage  5.29372e-05  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1217  CDS  NC_007760  1409057  1409845  789  short-chain dehydrogenase/reductase SDR  YP_464428  decreased coverage  3.50545e-05  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1290  CDS  NC_007760  1498387  1499136  750  hypothetical protein  YP_464501  decreased coverage  0.00418675  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1336  CDS  NC_007760  1546138  1546917  780  hypothetical protein  YP_464547  decreased coverage  0.00108006  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1337  CDS  NC_007760  1546994  1548310  1317  glycosyl transferase family protein  YP_464548  decreased coverage  0.00375711  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1338  CDS  NC_007760  1548311  1548694  384  flagellar protein FliS like protein  YP_464549  decreased coverage  0.000272458  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1339  CDS  NC_007760  1548780  1549619  840  flagellin-like  YP_464550  decreased coverage  0.000247158  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1349  CDS  NC_007760  1557642  1558331  690  flagellar L-ring protein  YP_464560  decreased coverage  0.00261084  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1355  CDS  NC_007760  1561976  1562674  699  sigma 28 (flagella/sporulation)  YP_464566  decreased coverage  0.000951359  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1362  CDS  NC_007760  1568900  1569610  711  flagellar biosynthesis protein FliP  YP_464573  decreased coverage  2.57945e-05  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1390  CDS  NC_007760  1597595  1598161  567  hypothetical protein  YP_464601  decreased coverage  0.000398418  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1391  CDS  NC_007760  1598154  1599512  1359  ATPase FliI/YscN  YP_464602  decreased coverage  0.00127996  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1395  CDS  NC_007760  1602825  1603112  288  flagellar hook-basal body complex protein (FliE)  YP_464606  decreased coverage  0.00257587  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1396  CDS  NC_007760  1603116  1603538  423  flagellar basal-body rod protein FlgC  YP_464607  decreased coverage  0.00396064  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1526  CDS  NC_007760  1752585  1752941  357  cupin domain-containing protein  YP_464736  decreased coverage  0.00102244  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1605  CDS  NC_007760  1840069  1840365  297  hypothetical protein  YP_464815  decreased coverage  0.00294222  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1608  CDS  NC_007760  1842556  1842951  396  thioredoxin  YP_464818  decreased coverage  0.00442059  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1670  CDS  NC_007760  1915458  1917089  1632  hypothetical protein  YP_464880  decreased coverage  0.00884296  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1671  CDS  NC_007760  1917224  1917793  570  dual specificity protein phosphatase  YP_464881  decreased coverage  0.00163756  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1682  CDS  NC_007760  1928895  1929881  987  ribosomal large subunit pseudouridine synthase B  YP_464892  decreased coverage  0.00200841  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1707  CDS  NC_007760  1957114  1959645  2532  ATP-dependent protease La  YP_464917  decreased coverage  0.00968626  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1811  CDS  NC_007760  2066069  2067277  1209  glycosyl transferase family protein  YP_465020  decreased coverage  0.000206288  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1968  CDS  NC_007760  2207185  2207583  399  DNA-binding protein Fis  YP_465176  decreased coverage  0.000705843  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_1969  CDS  NC_007760  2207610  2207951  342  integration host factor subunit alpha  YP_465177  decreased coverage  0.0019696  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2200  CDS  NC_007760  2479296  2481842  2547  PAS/PAC sensor hybrid histidine kinase  YP_465407  decreased coverage  0.00863508  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2210  CDS  NC_007760  2492358  2494259  1902  periplasmic sensor hybrid histidine kinase  YP_465417  decreased coverage  0.00664902  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2213  CDS  NC_007760  2495760  2496914  1155  major facilitator superfamily transporter  YP_465420  decreased coverage  0.0023669  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2214  CDS  NC_007760  2496918  2497820  903  LysR family transcriptional regulator  YP_465421  decreased coverage  0.000844726  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2260  CDS  NC_007760  2558600  2559916  1317  4Fe-4S ferredoxin, iron-sulfur binding protein  YP_465467  decreased coverage  0.00125851  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2261  CDS  NC_007760  2559929  2561203  1275  molecular chaperone-like  YP_465468  decreased coverage  0.00444779  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2285  CDS  NC_007760  2581623  2582663  1041  cytochrome c, class I  YP_465492  decreased coverage  0.00711214  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2402  CDS  NC_007760  2709096  2710958  1863  nitrous-oxide reductase  YP_465609  decreased coverage  0.00162507  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2418  CDS  NC_007760  2728352  2729464  1113  phosphatidylinositol alpha-mannosyltransferase  YP_465625  decreased coverage  0.00701147  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2617  CDS  NC_007760  2959687  2961522  1836  ABC multidrug efflux pump, fused ATPase and inner membrane subunits  YP_465824  decreased coverage  0.00654185  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2647  CDS  NC_007760  2994525  2995916  1392  sugar transferase  YP_465854  decreased coverage  0.00209327  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2766  CDS  NC_007760  3123289  3124701  1413  undecaprenyl-phosphate galactosephosphotransferase  YP_465973  decreased coverage  0.00178659  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2858  CDS  NC_007760  3233336  3233881  546  hypothetical protein  YP_466065  decreased coverage  0.00197139  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2918  CDS  NC_007760  3293600  3294316  717  hypothetical protein  YP_466125  decreased coverage  0.00819813  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_2987  CDS  NC_007760  3383606  3384316  711  tRNA/rRNA methyltransferase, SpoU  YP_466194  decreased coverage  0.000142491  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3085  CDS  NC_007760  3512569  3513921  1353  argininosuccinate synthase  YP_466291  decreased coverage  0.0020756  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3100  CDS  NC_007760  3531086  3532057  972  hypothetical protein  YP_466306  decreased coverage  0.00381116  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3127  CDS  NC_007760  3566370  3568181  1812  hypothetical protein  YP_466333  decreased coverage  0.00492503  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3368  CDS  NC_007760  3874990  3876273  1284  twitching motility protein  YP_466572  decreased coverage  0.00118657  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3416  CDS  NC_007760  3931028  3932311  1284  hypothetical protein  YP_466620  decreased coverage  0.000969861  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3417  CDS  NC_007760  3932321  3933547  1227  hypothetical protein  YP_466621  decreased coverage  0.00291729  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3423  CDS  NC_007760  3938590  3939747  1158  homogentisate 1,2-dioxygenase  YP_466627  decreased coverage  0.00233011  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_3621  CDS  NC_007760  4150001  4151134  1134  hypothetical protein  YP_466824  decreased coverage  9.26642e-05  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
 
Adeh_4009  CDS  NC_007760  4620094  4620786  693  two component transcriptional regulator  YP_467210  decreased coverage  0.00751412  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_4036  CDS  NC_007760  4644647  4645537  891  hypothetical protein  YP_467237  decreased coverage  0.00975433  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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Adeh_4042  CDS  NC_007760  4650473  4651543  1071  HNH endonuclease  YP_467243  decreased coverage  0.00210589  n/a    Anaeromyxobacter dehalogenans 2CP-C  Bacteria 
 
 
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