38 decreased-coverage genes were found for selected organism/s



Page 1 of 1    << first  < prev  1  next >  last >>   


Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Mfl080  CDS  NC_006055  102862  103734  873  30S ribosomal protein S6  YP_053320  decreased coverage  1.25992e-19  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl122  CDS  NC_006055  146917  147225  309  30S ribosomal protein S10  YP_053362  decreased coverage  5.36997e-55  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl145  CDS  NC_006055  158856  159614  759  methionine aminopeptidase  YP_053385  decreased coverage  3.74486e-10  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl160  CDS  NC_006055  181534  183534  2001  DNA ligase, polydeoxyribonucleotide synthase NAD+  YP_053400  decreased coverage  0.0025564  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl188  CDS  NC_006055  217758  218300  543  translation initiation factor IF-3  YP_053429  decreased coverage  6.75747e-16  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl209  CDS  NC_006055  234224  236338  2115  virulence associated protein, ribonuclease R  YP_053450  decreased coverage  0.000726605  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl221  CDS  NC_006055  247142  248302  1161  serine/threonine protein kinase  YP_053462  decreased coverage  3.75165e-08  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl248  CDS  NC_006055  278264  279490  1227  selenocysteine lyase, class V pyridoxal phosphate aminotransferase, cysteine desulfurase  YP_053489  decreased coverage  0.00113755  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl256  CDS  NC_006055  284962  285927  966  unknown transmembrane protein  YP_053497  decreased coverage  1.18519e-09  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl261  CDS  NC_006055  291458  296539  5082  unknown substrate ABC transporter permease component  YP_053502  decreased coverage  9.00021e-05  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl262  CDS  NC_006055  296634  301808  5175  unknown substrate ABC transporter permease component  YP_053503  decreased coverage  0.00148086  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl264  CDS  NC_006055  302391  304217  1827  putative multidrug ABC transporter  YP_053505  decreased coverage  4.04334e-22  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl275  CDS  NC_006055  315752  319762  4011  protein-export membrane protein  YP_053516  decreased coverage  0.00136953  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl283  CDS  NC_006055  325711  326280  570  riboflavin kinase/FAD synthase  YP_053524  decreased coverage  9.02633e-06  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl299  CDS  NC_006055  344834  345490  657  heat shock protein chaperone  YP_053540  decreased coverage  6.65204e-51  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl300  CDS  NC_006055  345490  346398  909  unknown transmembrane protein  YP_053541  decreased coverage  7.52765e-46  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl314  CDS  NC_006055  365694  368411  2718  DNA repair DNA/RNA helicase  YP_053555  decreased coverage  4.84028e-18  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl320  CDS  NC_006055  375817  376365  549  hypothetical protein  YP_053561  decreased coverage  1.11089e-23  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl326  CDS  NC_006055  383484  384404  921  unknown transmembrane protein  YP_053567  decreased coverage  1.28827e-37  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl360  CDS  NC_006055  420175  420846  672  hypothetical protein  YP_053601  decreased coverage  1.76839e-22  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl361  CDS  NC_006055  420925  421635  711  hypothetical protein  YP_053602  decreased coverage  6.2181e-23  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl368.1  CDS  NC_006055  429523  429768  246  30S ribosomal protein S20  YP_053611  decreased coverage  4.51128e-45  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl394  CDS  NC_006055  454506  455432  927  S-adenosyl-methyltransferase MraW  YP_053637  decreased coverage  9.73738e-05  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl423  CDS  NC_006055  495401  497245  1845  multidrug ABC transporter  YP_053666  decreased coverage  0.00524673  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl429  CDS  NC_006055  503732  507511  3780  hypothetical protein  YP_053672  decreased coverage  0.000645929  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl434  CDS  NC_006055  512060  512758  699  unknown transmembrane protein  YP_053677  decreased coverage  2.98855e-34  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl448  CDS  NC_006055  529927  530652  726  unknown transmembrane protein  YP_053690  decreased coverage  1.68912e-41  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl454  CDS  NC_006055  535709  536476  768  unknown lipoprotein  YP_053696  decreased coverage  8.38767e-33  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl460  CDS  NC_006055  541996  543810  1815  unknown lipoprotein  YP_053702  decreased coverage  1.76567e-11  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl469  CDS  NC_006055  553412  555250  1839  GTP-binding membrane protein, elongation factor  YP_053711  decreased coverage  1.35836e-05  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl538  CDS  NC_006055  634350  635297  948  GTPase  YP_053780  decreased coverage  6.07031e-10  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl539  CDS  NC_006055  635387  635773  387  50S ribosomal protein L19  YP_053781  decreased coverage  1.75724e-09  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl551  CDS  NC_006055  643489  644328  840  hypothetical protein  YP_053793  decreased coverage  3.89415e-08  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl552  CDS  NC_006055  644345  644914  570  hypothetical protein  YP_053794  decreased coverage  1.75256e-11  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mfl565  CDS  NC_006055  657113  657382  270  phosphotransferase system phosphohistidine-containing protein  YP_053807  decreased coverage  2.17901e-05  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mflt021  tRNA  NC_006055  596165  596241  77  tRNA-Met    decreased coverage  0.000111165  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mflt022  tRNA  NC_006055  596250  596326  77  tRNA-Met    decreased coverage  0.000116471  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Mflt07  tRNA  NC_006055  191498  191581  84  tRNA-Leu    decreased coverage  8.15997e-05  n/a    Mesoplasma florum L1  Bacteria 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>