28 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
TC0060  CDS  NC_002620  69809  70651  843  ParB family chromosome partioning protein  NP_296444  decreased coverage  0.00610373  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0133  CDS  NC_002620  164120  164692  573  elongation factor P  NP_296512  decreased coverage  0.00102096  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0161  CDS  NC_002620  195016  195513  498  hypothetical protein  NP_296540  decreased coverage  0.00228251  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0167  CDS  NC_002620  200199  200558  360  ribonuclease P  NP_296546  decreased coverage  0.00183081  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0168  CDS  NC_002620  200571  200708  138  50S ribosomal protein L34  NP_296547  decreased coverage  0.000640095  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0189  CDS  NC_002620  220353  221705  1353  hypothetical protein  NP_296568  decreased coverage  0.00928338  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0311  CDS  NC_002620  366951  367811  861  hypothetical protein  NP_296690  decreased coverage  0.00121957  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0392  CDS  NC_002620  456205  456636  432  hypothetical protein  NP_296770  decreased coverage  0.00973872  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0403  CDS  NC_002620  463114  463959  846  Nlp/P60 family protein  NP_296781  decreased coverage  0.000865774  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0497  CDS  NC_002620  603613  604113  501  hypothetical protein  NP_296874  decreased coverage  0.00011782  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0503  CDS  NC_002620  609514  609885  372  inclusion membrane protein B  NP_296880  decreased coverage  0.00783871  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0591  CDS  NC_002620  709602  710120  519  50S ribosomal protein L10  NP_296967  decreased coverage  0.00143535  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0596  CDS  NC_002620  712351  713535  1185  elongation factor Tu  NP_296972  decreased coverage  0.00435785  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0731  CDS  NC_002620  868979  869536  558  euo protein  NP_297105  decreased coverage  0.000124641  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0790  CDS  NC_002620  933668  934225  558  hypothetical protein  NP_297163  decreased coverage  0.00722011  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0795  CDS  NC_002620  938023  938421  399  30S ribosomal protein S11  NP_297168  decreased coverage  0.0026055  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0796  CDS  NC_002620  938443  938811  369  30S ribosomal protein S13  NP_297169  decreased coverage  8.12257e-05  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0802  CDS  NC_002620  942174  942575  402  30S ribosomal protein S8  NP_297175  decreased coverage  0.000681692  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0803  CDS  NC_002620  942593  943135  543  50S ribosomal protein L5  NP_297176  decreased coverage  0.000201599  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0804  CDS  NC_002620  943137  943472  336  50S ribosomal protein L24  NP_297177  decreased coverage  0.000495791  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0805  CDS  NC_002620  943485  943853  369  50S ribosomal protein L14  NP_297178  decreased coverage  0.000675235  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0815  CDS  NC_002620  948000  948665  666  50S ribosomal protein L3  NP_297188  decreased coverage  0.000249143  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0833  CDS  NC_002620  968582  969493  912  uracil phosphoribosyltransferase  NP_297206  decreased coverage  0.00074745  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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TC0872  CDS  NC_002620  1010206  1010994  789  virulence protein pGP6-D-related protein  NP_297245  decreased coverage  0.00520201  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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tRNA-Arg-1  tRNA  NC_002620  1035302  1035374  73  tRNA-Arg    decreased coverage  1.09224e-05  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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tRNA-Leu-1  tRNA  NC_002620  297053  297134  82  tRNA-Leu    decreased coverage  9.65884e-05  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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tRNA-Leu-4  tRNA  NC_002620  934309  934391  83  tRNA-Leu    decreased coverage  0.000953822  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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tRNA-Thr-3  tRNA  NC_002620  713581  713652  72  tRNA-Thr    decreased coverage  1.31783e-05  n/a    Chlamydia muridarum Nigg  Bacteria 
 
 
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