47 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
ANIA_01467  CDS  BN001307  822684  824385  1702  conserved hypothetical protein  CBF84919  normal  decreased coverage  0.00677461  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01543  CDS  BN001307  1064319  1066696  2378  hypothetical fumarate reductase (Eurofung)  CBF85078  decreased coverage  0.000554356  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01604  CDS  BN001307  1273477  1275003  1527  putative alpha 1,3 glucanase GH71 (Eurofung)  CBF85206  decreased coverage  0.000126712  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01627  CDS  BN001307  1353841  1354603  763  hypothetical protein  CBF85249  decreased coverage  0.000420501  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01640  CDS  BN001307  1395041  1397527  2487  conserved hypothetical protein  CBF85275  decreased coverage  0.00227991  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01656  CDS  BN001307  1469563  1470852  1290  conserved hypothetical protein  CBF85308  decreased coverage  0.00000898037  normal  0.655508  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01659  CDS  BN001307  1477598  1479588  1991  amino acid transporter (Eurofung)  CBF85316  decreased coverage  0.00286365  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01661  CDS  BN001307  1487264  1488953  1690  conserved hypothetical protein  CBF85319  decreased coverage  0.000639839  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01732  CDS  BN001307  1689679  1691480  1802  Proline-specific permease (Proline transport protein) [Source:UniProtKB/Swiss-Prot;Acc:P18696]  CBF85456  normal  0.839394  decreased coverage  0.00801022  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01768  CDS  BN001307  1777770  1780543  2774  VHS domain protein (AFU_orthologue; AFUA_6G09080)  CBF85525  decreased coverage  0.000645299  normal  0.413076  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01813  CDS  BN001307  1913760  1914503  744  conserved hypothetical protein  CBF85609  decreased coverage  0.000356415  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01821  CDS  BN001307  1940107  1941378  1272  FAD-binding monooxygenase, putative (AFU_orthologue; AFUA_8G07040)  CBF85628  decreased coverage  0.00520599  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01834  CDS  BN001307  1968929  1971253  2325  conserved hypothetical protein  CBF85652  decreased coverage  0.000874174  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01905  CDS  BN001307  2162624  2164015  1392  hypothetical protein  CBF85797  decreased coverage  0.0086932  normal  0.825028  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01919  CDS  BN001307  2206090  2207941  1852  pfkB family carbohydrate kinase superfamily (AFU_orthologue; AFUA_4G09500)  CBF85826  normal  decreased coverage  0.0083327  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01921  CDS  BN001307  2211860  2213001  1142  microbody (peroxisome) proliferation protein peroxin 11 (Eurofung)  CBF85830  normal  decreased coverage  0.00456295  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01922  CDS  BN001307  2213891  2215694  1804  proteasome regulatory particle subunit (RpnG), putative (AFU_orthologue; AFUA_6G07760)  CBF85832  normal  decreased coverage  0.00836601  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01952  CDS  BN001307  2311429  2312627  1199  conserved hypothetical protein  CBF85885  decreased coverage  0.000481034  normal  0.0368724  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01970  CDS  BN001307  2376633  2377497  865  50S ribosomal protein L24 (AFU_orthologue; AFUA_4G10740)  CBF85918  decreased coverage  0.00000000553302  hitchhiker  0.00696357  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01983  CDS  BN001307  2403888  2406826  2939  small nucleolar ribonucleoprotein complex component (Utp5), putative (AFU_orthologue; AFUA_4G10550)  CBF85945  normal  decreased coverage  0.000779795  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_01995  CDS  BN001307  2441770  2444480  2711  conserved hypothetical protein  CBF85973  decreased coverage  0.00680781  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02012  CDS  BN001307  2506128  2508955  2828  RfeF [Source:UniProtKB/TrEMBL;Acc:Q8J174]  CBF86010  decreased coverage  0.00625491  normal  0.354212  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02048  CDS  BN001307  2639455  2641012  1558  SNARE complex subunit (Tlg2), putative (Eurofung)  CBF86077  decreased coverage  0.000241869  normal  0.351676  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02059  CDS  BN001307  2663226  2664964  1739  Putative uncharacterized proteinVelC ; [Source:UniProtKB/TrEMBL;Acc:Q5BBM1]  CBF86097  decreased coverage  0.00000138964  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02067  CDS  BN001307  2691763  2694460  2698  Serine/threonine-protein kinase ste20 (EC 2.7.11.1) [Source:UniProtKB/Swiss-Prot;Acc:Q5BBL3]  CBF86111  decreased coverage  0.00224499  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02122  CDS  BN001307  2880794  2883066  2273  Putative Zn(II)2Cys6 transcription factor (Eurofung)  CBF86221  decreased coverage  0.00393645  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02167  CDS  BN001307  3030054  3032746  2693  HET-C domain protein HetC (AFU_orthologue; AFUA_2G15840)  CBF86305  decreased coverage  0.00183003  normal  0.378217  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02171  CDS  BN001307  3038756  3039723  968  conserved hypothetical protein  CBF86311  decreased coverage  0.000492729  normal  0.46458  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02173  CDS  BN001307  3043603  3046124  2522  calcium-dependent mitochondrial carrier protein, putative (Eurofung)  CBF86314  decreased coverage  0.00497794  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02220  CDS  BN001307  3182072  3182836  765  conserved hypothetical protein  CBF86407  decreased coverage  0.0000353378  normal  0.189547  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02231  CDS  BN001307  3215071  3216945  1875  SAP domain protein (AFU_orthologue; AFUA_5G07240)  CBF86430  normal  decreased coverage  0.000264985  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02296  CDS  BN001307  3417976  3420937  2962  DNA damage and replication checkpoint protein Rfx1, putative (AFU_orthologue; AFUA_5G06120)  CBF86555  decreased coverage  0.00552688  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02303  CDS  BN001307  3439998  3441904  1907  GPI mannosyltransferase 4 (EC 2.4.1.-)(GPI mannosyltransferase IV)(GPI-MT-IV) [Source:UniProtKB/Swiss-Prot;Acc:Q5BAX7]  CBF86568  decreased coverage  0.00235199  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02311  CDS  BN001307  3462900  3465051  2152  phosphomevalonate kinase (AFU_orthologue; AFUA_5G10680)  CBF86584  decreased coverage  0.0000000089901  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02502  CDS  BN001307  4093584  4094440  857  hypothetical protein  CBF86984  decreased coverage  0.000000305516  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02520  CDS  BN001307  4154754  4156193  1440  Pheromone receptor PREB [Source:UniProtKB/TrEMBL;Acc:Q7SI72]  CBF87016  decreased coverage  0.0000165068  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02573  CDS  BN001307  4335592  4336751  1160  conserved hypothetical protein  CBF87123  decreased coverage  0.0000109595  normal  0.411684  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02590  CDS  BN001307  4401412  4403079  1668  conserved hypothetical protein  CBF87158  decreased coverage  0.000954672  normal  0.116226  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_02610  CDS  BN001307  4461588  4463545  1958  cytochrome P450, putative (Eurofung)  CBF87197  decreased coverage  0.000000244519  normal  0.0264899  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_08976  CDS  BN001307  240294  240999  706  conserved hypothetical protein  CBF84533  decreased coverage  0.0000710919  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_08990  CDS  BN001307  205021  207020  2000  GABA transporter, putative (Eurofung)  CBF84506  decreased coverage  0.00206587  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_08991  CDS  BN001307  203563  204378  816  conserved hypothetical protein  CBF84504  decreased coverage  0.000025122  normal  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_09538  CDS  BN001307  2922045  2924526  2482  C2H2 finger domain protein, putative (AFU_orthologue; AFUA_2G16230)  CBF86243  decreased coverage  0.00000221271  normal  0.258787  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_10215  CDS  BN001307  992454  994480  2027  peroxisomal targeting signal (PTS1) receptor protein peroxin 5 (Eurofung)  CBF85028  decreased coverage  0.00000612411  normal  0.654696  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_10253  CDS  BN001307  2392923  2393372  450  sister chromatid cohesion protein Ctf8, putative (AFU_orthologue; AFUA_4G10630)  CBF85935  decreased coverage  0.0015771  hitchhiker  0.00899727  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_11309  CDS  BN001307  1196151  1196882  732  hypothetical protein  CBF85155  normal  decreased coverage  0.00615958  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
-
 
ANIA_11315  CDS  BN001307  1833688  1834116  429  hypothetical protein  CBF85562  decreased coverage  0.00610608  normal  0.594053  Aspergillus nidulans FGSC A4  Eukaryota 
 
 
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