23 decreased-coverage genes were found for selected organism/s



Page 1 of 1    << first  < prev  1  next >  last >>   


Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
NSE_0006  CDS  NC_007798  5975  6454  480  hypothetical protein  YP_505909  decreased coverage  5.8552e-10  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0041  CDS  NC_007798  31400  32296  897  hypothetical protein  YP_505943  decreased coverage  0.0073008  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0071  CDS  NC_007798  63633  63851  219  hypothetical protein  YP_505972  decreased coverage  8.84727e-05  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0072  CDS  NC_007798  64070  64426  357  hypothetical protein  YP_505973  decreased coverage  0.00018601  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0107  CDS  NC_007798  84763  85689  927  hypothetical protein  YP_506007  decreased coverage  7.31634e-09  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0163  CDS  NC_007798  130622  131500  879  FAD-dependent thymidylate synthase  YP_506060  decreased coverage  5.50226e-05  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0216  CDS  NC_007798  182149  183126  978  phenylalanyl-tRNA synthetase, alpha subunit  YP_506111  decreased coverage  0.000779561  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0217  CDS  NC_007798  183158  183616  459  ribose 5-phosphate isomerase B  YP_506112  decreased coverage  0.00182493  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0225  CDS  NC_007798  191077  192330  1254  adenylosuccinate synthetase  YP_506119  decreased coverage  4.89158e-08  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0242  CDS  NC_007798  205891  207426  1536  51 kDa major antigen  YP_506136  decreased coverage  1.85861e-07  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0327  CDS  NC_007798  268330  269088  759  CBS/transporter associated domain-containing protein  YP_506216  decreased coverage  0.0087297  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0328  CDS  NC_007798  269201  270601  1401  hypothetical protein  YP_506217  decreased coverage  0.00750819  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0342  CDS  NC_007798  280727  281845  1119  cell division protein FtsZ  YP_506231  decreased coverage  1.28009e-07  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0502  CDS  NC_007798  422881  423978  1098  carbamoyl-phosphate synthase, small subunit  YP_506386  decreased coverage  2.64253e-07  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0591  CDS  NC_007798  511807  513279  1473  hypothetical protein  YP_506471  decreased coverage  1.56898e-06  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0621  CDS  NC_007798  542756  543523  768  cytochrome c oxidase, subunit II  YP_506500  decreased coverage  3.45466e-08  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0845  CDS  NC_007798  747634  748776  1143  branched-chain amino acid transporter  YP_506713  decreased coverage  3.80622e-07  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0846  CDS  NC_007798  748965  750164  1200  hypothetical protein  YP_506714  decreased coverage  5.5342e-07  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0874  CDS  NC_007798  781561  781671  111  hypothetical protein  YP_506741  decreased coverage  8.83526e-11  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0898  CDS  NC_007798  800931  801230  300  ribosomal protein L21  YP_506764  decreased coverage  4.43471e-09  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0899  CDS  NC_007798  801342  801932  591  recombination protein RecR  YP_506765  decreased coverage  2.13296e-08  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0915  CDS  NC_007798  812233  812787  555  signal peptidase II  YP_506779  decreased coverage  1.40419e-09  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
NSE_0916  CDS  NC_007798  812789  814144  1356  putative carboxypeptidase  YP_506780  decreased coverage  9.97255e-07  n/a    Neorickettsia sennetsu str. Miyayama  Bacteria 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>