19 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
CA2559_01665  CDS  NC_014230  416987  418357  1371  saccharopine dehydrogenase, putative  YP_003715099  decreased coverage  0.000853832  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_02470  CDS  NC_014230  580707  581273  567  5-formyltetrahydrofolate cyclo-ligase  YP_003715260  decreased coverage  0.00344803  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_02920  CDS  NC_014230  674925  676175  1251  O-antigen transporter  YP_003715349  decreased coverage  0.00862586  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_02990  CDS  NC_014230  690371  691012  642  hypothetical protein  YP_003715363  decreased coverage  5.22079e-05  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_03240  CDS  NC_014230  743905  745716  1812  Zn-dependent aminopeptidase  YP_003715412  decreased coverage  0.0027723  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_05205  CDS  NC_014230  1181307  1182365  1059  hypothetical protein  YP_003715805  decreased coverage  0.00562513  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_05340  CDS  NC_014230  1204760  1205833  1074  phenylacetate-CoA oxygenase, PaaK subunit  YP_003715831  decreased coverage  0.000116603  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_06475  CDS  NC_014230  1442582  1443985  1404  hypothetical protein  YP_003716055  decreased coverage  0.00547225  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_07185  CDS  NC_014230  1596446  1597411  966  hypothetical protein  YP_003716196  decreased coverage  0.00317867  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_07741  CDS  NC_014230  1708776  1709831  1056  putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase  YP_003716295  decreased coverage  0.00118308  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_08076  CDS  NC_014230  1771743  1772765  1023  L-allo-threonine aldolase  YP_003716362  decreased coverage  0.00986668  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_08366  CDS  NC_014230  1834878  1835606  729  ABC transporter, permease protein  YP_003716420  decreased coverage  0.00446835  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_08371  CDS  NC_014230  1835610  1835906  297  hypothetical protein  YP_003716421  decreased coverage  0.00286255  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_09708  CDS  NC_014230  2115522  2116058  537  DNA topoisomerase IV subunit B  YP_003716687  decreased coverage  0.000530911  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_09743  CDS  NC_014230  2124250  2124882  633  hypothetical protein  YP_003716694  decreased coverage  0.00710021  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_10253  CDS  NC_014230  2239375  2240298  924  hypothetical protein  YP_003716796  decreased coverage  0.00229932  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_11533  CDS  NC_014230  2514590  2515003  414  Response regulator receiver domain protein (CheY)  YP_003717048  decreased coverage  0.00681929  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_11538  CDS  NC_014230  2515000  2515539  540  putative guanylate cyclase-related protein  YP_003717049  decreased coverage  0.00897184  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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CA2559_12123  CDS  NC_014230  2632665  2633669  1005  thiamine biosynthesis lipoprotein ApbE precursor  YP_003717166  decreased coverage  0.000732987  n/a    Croceibacter atlanticus HTCC2559  Bacteria 
 
 
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