26 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Mmcs_0449  CDS  NC_008146  503577  505412  1836  hypothetical protein  YP_637626  decreased coverage  0.00263959  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1030  CDS  NC_008146  1129635  1130174  540  50S ribosomal protein L6  YP_638200  decreased coverage  3.75476e-08  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1031  CDS  NC_008146  1130178  1130582  405  50S ribosomal protein L18  YP_638201  decreased coverage  2.95773e-08  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1083  CDS  NC_008146  1183203  1183622  420  hypothetical protein  YP_638253  decreased coverage  0.00152048  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1216  CDS  NC_008146  1314951  1316183  1233  Serine-type D-Ala-D-Ala carboxypeptidase  YP_638384  decreased coverage  0.0088624  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1239  CDS  NC_008146  1341640  1342728  1089  NLP/P60  YP_638407  decreased coverage  0.00968494  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1515  CDS  NC_008146  1647820  1649367  1548  AMP-dependent synthetase and ligase  YP_638682  decreased coverage  0.00288915  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_1848  CDS  NC_008146  1991857  1992693  837  beta-lactamase-like protein  YP_639013  decreased coverage  0.00738253  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_2297  CDS  NC_008146  2437468  2438736  1269  acyl-CoA dehydrogenase-like protein  YP_639461  decreased coverage  0.0092497  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_2298  CDS  NC_008146  2438736  2439893  1158  acyl-CoA dehydrogenase-like protein  YP_639462  decreased coverage  0.00565066  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_2807  CDS  NC_008146  2953579  2953881  303  urease subunit gamma  YP_639970  decreased coverage  0.00652173  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3151  CDS  NC_008146  3343559  3344998  1440  hypothetical protein  YP_640314  decreased coverage  0.00208087  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3362  CDS  NC_008146  3560921  3563695  2775  pyruvate dehydrogenase subunit E1  YP_640525  decreased coverage  0.00342151  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3452  CDS  NC_008146  3663223  3664122  900  GTP-binding protein Era  YP_640615  decreased coverage  0.00911502  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3562  CDS  NC_008146  3793302  3793775  474  hypothetical protein  YP_640725  decreased coverage  0.00833026  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3601  CDS  NC_008146  3839876  3840340  465  CMP/dCMP deaminase, zinc-binding protein  YP_640764  decreased coverage  0.00422327  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3640  CDS  NC_008146  3886153  3886800  648  oligoribonuclease  YP_640803  decreased coverage  0.00635145  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3747  CDS  NC_008146  3999851  4001173  1323  Rieske (2Fe-2S) region  YP_640909  decreased coverage  0.00627634  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_3872  CDS  NC_008146  4125797  4127050  1254  UDP-N-acetylglucosamine 1-carboxyvinyltransferase  YP_641033  decreased coverage  1.95391e-06  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_4046  CDS  NC_008146  4318009  4318524  516  hypothetical protein  YP_641207  decreased coverage  0.0031865  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_4145  CDS  NC_008146  4410387  4411058  672  hypothetical protein  YP_641306  decreased coverage  0.00943062  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_4146  CDS  NC_008146  4411050  4412228  1179  cystathionine gamma-synthase  YP_641307  decreased coverage  0.00234091  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_4341  CDS  NC_008146  4618109  4619284  1176  major facilitator transporter  YP_641502  decreased coverage  0.00631729  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_4949  CDS  NC_008146  5240493  5241407  915  haloalkane dehalogenase  YP_642109  decreased coverage  0.00300745  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_5621  CDS  NC_008147  194794  195639  846  hypothetical protein  YP_642777  decreased coverage  3.70855e-05  normal  0.113529  Mycobacterium sp. MCS  Bacteria 
 
 
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Mmcs_R0041  rRNA  NC_008146  4123929  4125443  1515  16S ribosomal RNA    decreased coverage  7.34371e-06  n/a    Mycobacterium sp. MCS  Bacteria 
 
 
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