6626 genes were found for organism Methylobacterium radiotolerans JCM 2831



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Mrad2831_0001  CDS  NC_010505  15  281  267  30S ribosomal protein S20  YP_001752711  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0002  CDS  NC_010505  769  2265  1497  chromosomal replication initiation protein  YP_001752712  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0003  CDS  NC_010505  2536  3744  1209  acetyl-CoA acetyltransferase  YP_001752713  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0004  CDS  NC_010505  3865  4380  516  hypothetical protein  YP_001752714  normal  0.281699  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0005  CDS  NC_010505  4411  5190  780  diguanylate phosphodiesterase  YP_001752715  normal  0.162907  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0006  CDS  NC_010505  5304  7505  2202  3-hydroxyacyl-CoA dehydrogenase NAD-binding  YP_001752716  normal  0.0670194  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0007  CDS  NC_010505  7475  8452  978  LysR family transcriptional regulator  YP_001752717  normal  0.378538  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0008  CDS  NC_010505  8599  9507  909  extracellular solute-binding protein  YP_001752718  normal  0.427147  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0009  CDS  NC_010505  9523  10581  1059  aromatic amino acid beta-eliminating lyase/threonine aldolase  YP_001752719  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0010  CDS  NC_010505  10586  11455  870  exonuclease RNase T and DNA polymerase III  YP_001752720  normal  0.847041  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0011  CDS  NC_010505  11528  13960  2433  DNA ligase, NAD-dependent  YP_001752721  normal  0.927045  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0012  CDS  NC_010505  14025  15317  1293  major facilitator transporter  YP_001752722  normal  0.0411083  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0013  CDS  NC_010505  15446  16162  717  4'-phosphopantetheinyl transferase  YP_001752723  normal  0.0201298  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0014  CDS  NC_010505  17123  17467  345  hypothetical protein  YP_001752724  normal  0.0217531  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0015  CDS  NC_010505  17982  18734  753  hypothetical protein  YP_001752725  normal  0.0203643  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0016  CDS  NC_010505  18880  20181  1302  hypothetical protein  YP_001752726  normal  0.0165869  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0017  CDS  NC_010505  20186  21064  879  formyl transferase domain-containing protein  YP_001752727  normal  0.0278166  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0018  CDS  NC_010505  21443  22399  957  hypothetical protein  YP_001752728  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0019  CDS  NC_010505  22407  23546  1140  queuine tRNA-ribosyltransferase  YP_001752729  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0020  CDS  NC_010505  23543  24607  1065  S-adenosylmethionine:tRNA ribosyltransferase-isomerase  YP_001752730  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0021  CDS  NC_010505  24706  24963  258  hypothetical protein  YP_001752731  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0022  CDS  NC_010505  24960  25178  219  hypothetical protein  YP_001752732  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0023  CDS  NC_010505  25276  26163  888  cation diffusion facilitator family transporter  YP_001752733  normal  normal  0.556428  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0024  CDS  NC_010505  26172  27428  1257  acyl-CoA dehydrogenase type 2  YP_001752734  normal  normal  0.641341  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0025  CDS  NC_010505  27471  28586  1116  alkanesulfonate monooxygenase  YP_001752735  normal  0.250333  normal  0.590085  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0026  CDS  NC_010505  28799  29563  765  Surfeit locus 1 family protein  YP_001752736  normal  0.13352  normal  0.706144  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0027  CDS  NC_010505  29560  29934  375  hypothetical protein  YP_001752737  normal  0.431177  normal  0.352354  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0028  CDS  NC_010505  30083  30946  864  cytochrome c oxidase subunit III  YP_001752738  normal  0.117348  normal  0.405844  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0029  CDS  NC_010505  31094  31705  612  cytochrome c oxidase assembly protein CtaG/Cox11  YP_001752739  normal  0.310353  normal  0.893944  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0030  CDS  NC_010505  31716  31880  165  protein CoxF  YP_001752740  normal  0.148285  normal  0.786254  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0031  CDS  NC_010505  31886  32836  951  protoheme IX farnesyltransferase  YP_001752741  normal  0.823652  normal  0.697538  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0032  CDS  NC_010505  33052  34680  1629  cytochrome c oxidase, subunit I  YP_001752742  normal  normal  0.616804  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0033  CDS  NC_010505  34731  35570  840  cytochrome c oxidase, subunit II  YP_001752743  normal  0.979273  normal  0.511366  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0034  CDS  NC_010505  35872  36714  843  formate dehydrogenase family accessory protein FdhD  YP_001752744  normal  normal  0.663186  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0035  CDS  NC_010505  36738  37586  849  hypothetical protein  YP_001752745  normal  normal  0.355849  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0036  CDS  NC_010505  38125  42840  4716  glutamate synthase (ferredoxin)  YP_001752746  normal  normal  0.790561  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0037  CDS  NC_010505  42943  44376  1434  glutamate synthase subunit beta  YP_001752747  normal  0.359975  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0038  CDS  NC_010505  44401  45825  1425  hypothetical protein  YP_001752748  normal  0.034989  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0039  CDS  NC_010505  45919  47109  1191  lytic murein transglycosylase  YP_001752749  normal  0.265426  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0040  CDS  NC_010505  47114  48106  993  UDP-glucose 4-epimerase  YP_001752750  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0041  CDS  NC_010505  48278  49147  870  UTP-glucose-1-phosphate uridylyltransferase  YP_001752751  normal  0.581987  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0042  CDS  NC_010505  49539  50441  903  N-formylglutamate amidohydrolase  YP_001752752  normal  0.827378  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0043  CDS  NC_010505  50648  51004  357  response regulator receiver protein  YP_001752753  normal  0.0842812  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0044  CDS  NC_010505  51119  51388  270  glutaredoxin 3  YP_001752754  normal  0.31587  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0045  CDS  NC_010505  51381  52238  858  Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase  YP_001752755  normal  0.75461  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0046  CDS  NC_010505  52259  52711  453  hypothetical protein  YP_001752756  normal  0.564208  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0047  CDS  NC_010505  52735  53223  489  disulphide bond formation protein DsbB  YP_001752757  normal  0.902523  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0048  CDS  NC_010505  53226  53807  582  DedA family protein  YP_001752758  normal  0.331366  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0049  CDS  NC_010505  54191  55132  942  FAD dependent oxidoreductase  YP_001752759  normal  0.0871855  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0050  CDS  NC_010505  55129  56049  921  histone deacetylase superfamily protein  YP_001752760  normal  0.0204903  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0051  CDS  NC_010505  56234  56407  174  hypothetical protein  YP_001752761  normal  0.0138158  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0052  CDS  NC_010505  56551  56793  243  hypothetical protein  YP_001752762  normal  0.0176443  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0053  CDS  NC_010505  56930  57565  636  KDPG and KHG aldolase  YP_001752763  normal  0.36319  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0054  CDS  NC_010505  57562  58440  879  2-dehydro-3-deoxygalactonokinase  YP_001752764  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0055  CDS  NC_010505  58652  59410  759  ABC transporter related  YP_001752765  normal  0.880388  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0056  CDS  NC_010505  59403  60143  741  ABC transporter related  YP_001752766  normal  0.679259  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0057  CDS  NC_010505  60237  61454  1218  extracellular ligand-binding receptor  YP_001752767  normal  0.652717  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0058  CDS  NC_010505  61483  62370  888  inner-membrane translocator  YP_001752768  normal  0.148316  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0059  CDS  NC_010505  62391  63377  987  inner-membrane translocator  YP_001752769  normal  0.0244383  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0060  CDS  NC_010505  63523  63876  354  hypothetical protein  YP_001752770  normal  0.0457605  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0061  CDS  NC_010505  63936  65882  1947  DNA mismatch repair protein MutL  YP_001752771  normal  0.340953  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0062  CDS  NC_010505  66069  66836  768  short-chain dehydrogenase/reductase SDR  YP_001752772  normal  0.710312  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0063  CDS  NC_010505  66877  68529  1653  AMP-dependent synthetase and ligase  YP_001752773  normal  0.488746  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0064  CDS  NC_010505  68749  69288  540  hypothetical protein  YP_001752774  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0065  CDS  NC_010505  69285  70223  939  alpha/beta hydrolase fold  YP_001752775  normal  0.418354  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0066  CDS  NC_010505  70620  71060  441  XRE family transcriptional regulator  YP_001752776  normal  0.0319384  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0067  CDS  NC_010505  71116  71490  375  cupin 2 domain-containing protein  YP_001752777  normal  0.0540869  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0068  CDS  NC_010505  71498  72055  558  methyltransferase  YP_001752778  normal  0.0438519  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0069  CDS  NC_010505  72052  73857  1806  RNA-binding S4 domain-containing protein  YP_001752779  normal  0.394363  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0070  CDS  NC_010505  73989  74165  177  hypothetical protein  YP_001752780  normal  0.842765  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0071  CDS  NC_010505  74243  74434  192  CsbD family protein  YP_001752781  normal  0.839575  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0072  CDS  NC_010505  74581  75069  489  CMP/dCMP deaminase zinc-binding  YP_001752782  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0073  CDS  NC_010505  75133  75837  705  short-chain dehydrogenase/reductase SDR  YP_001752783  normal  0.623849  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0074  CDS  NC_010505  75845  77623  1779  hypothetical protein  YP_001752784  normal  0.679979  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0075  CDS  NC_010505  77944  78444  501  MucR family transcriptional regulator  YP_001752785  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0076  CDS  NC_010505  78660  79835  1176  major facilitator transporter  YP_001752786  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0077  CDS  NC_010505  79840  84684  4845  NAD-glutamate dehydrogenase  YP_001752787  normal  0.285162  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0078  CDS  NC_010505  84844  85260  417  MarR family transcriptional regulator  YP_001752788  normal  0.742526  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0079  CDS  NC_010505  85290  86576  1287  major facilitator transporter  YP_001752789  normal  0.129235  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0080  CDS  NC_010505  86664  87935  1272  major facilitator transporter  YP_001752790  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0081  CDS  NC_010505  88011  88538  528  DoxX family protein  YP_001752791  normal  0.614954  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0082  CDS  NC_010505  88539  90038  1500  major facilitator transporter  YP_001752792  normal  0.800514  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0083  CDS  NC_010505  90195  91085  891  hypothetical protein  YP_001752793  normal  0.89818  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0084  CDS  NC_010505  91334  92827  1494  inosine-5'-monophosphate dehydrogenase  YP_001752794  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0085  CDS  NC_010505  92835  93779  945  2-dehydropantoate 2-reductase  YP_001752795  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0086  CDS  NC_010505  93801  93971  171  hypothetical protein  YP_001752796  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0087  CDS  NC_010505  94372  95484  1113  Fmu (Sun) domain-containing protein  YP_001752797  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0088  CDS  NC_010505  95600  96613  1014  hypothetical protein  YP_001752798  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0089  CDS  NC_010505  96618  97856  1239  hypothetical protein  YP_001752799  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0090  CDS  NC_010505  97963  98487  525  hypothetical protein  YP_001752800  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0091  CDS  NC_010505  98579  99592  1014  WD-40 repeat-containing protein  YP_001752801  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0092  CDS  NC_010505  99589  100263  675  hypothetical protein  YP_001752802  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0093  CDS  NC_010505  100471  100902  432  response regulator receiver protein  YP_001752803  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0094  CDS  NC_010505  100927  101292  366  PRC-barrel protein  YP_001752804  normal  0.872703  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0095  CDS  NC_010505  101324  101953  630  hypothetical protein  YP_001752805  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0096  CDS  NC_010505  101978  102532  555  NUDIX hydrolase  YP_001752806  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0097  CDS  NC_010505  102627  103862  1236  protein of unknown function DUF610 YibQ  YP_001752807  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0098  CDS  NC_010505  104036  105376  1341  carboxyl-terminal protease  YP_001752808  normal  0.289255  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0099  CDS  NC_010505  105376  106743  1368  peptidase M23  YP_001752809  normal  normal  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
Mrad2831_0100  CDS  NC_010505  106750  107244  495  rRNA large subunit methyltransferase  YP_001752810  normal  normal  0.465557  Methylobacterium radiotolerans JCM 2831  Bacteria 
 
 
-
 
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