Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2360 |
Symbol | |
ID | 5422827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 2633071 |
End bp | 2636250 |
Gene Length | 3180 bp |
Protein Length | 1059 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640881614 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_001417260 |
Protein GI | 154246302 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCT CACACTTCTT CATCGACCGG CCCATCTTCG CCTCGGTGGT GTCCGCCGTC GTCATGATCC TTGGCGCGGT GACCTACCTG CGCCTGCCCG TGGCCCAGTA TCCCGACATC GCCCCGCCGG TGATCACGGT GACCGGGCAA TATCCCGGCG CCTCGGCGGA GATCGTCGCC GAGACCGTGG TCGCGCCCAT CGAGCAGCAG ATCAACGGCG TGGAGCACAT GCTCTACCTG GCGTCCAACT CGACGGCGGA CGGCCGCTTC TCCATTTCCG TCACCTTCGA TATCGGCACC AACCTCGACA TCGCCCAGGT GCAGGTGCAG AACCGCGTCG CCATCGCCCA GCCGCGCCTG CCCAGCGAAG TGCAGCAGGT GGGCGTGGTC ACGGCCAAGT CATCGCCCGA CCTGATGCTG GTGGTGAGCC TGTATTCGCC CGACGGCTCG CGCGATCCGC TCTTCATCTC GAACTTCGCC AATATCGAGA TCAAGGACGT GCTCTCGCGC ATTGACGGCG TGGGCTCCAT CACCGTGTTC GGCTCGCGCG AATACGCCAT GCAGATCTGG CTCGATCCGG ACCGGCTGTC CCAGCTCAAC CTCACCACCA CCGACGTGGT GGCGGCGCTG AAGGCGCAGA ACGTCCAGGT GGCCTCCGGC GTGCTCAACG CGCCGCCGGT GCCGGAGCAG CGTGCCTTCC AGATCGCCGT GCGCACCCTC GGCCGGCTTT CGGATGCGCG GGCCTTCTCC GACATCGTCA TCAAGCAGAC CGACCAGGCG CTGGTGCGGC TGAAGGACGT GGGCCGGGTG GAGATCGCGG CCCAGGACTA TGCCTCGACC TCGTTCCTCG ACAAGGACAT CTCGATCCAG CTCGGCGTGT TCCAGCGCCC CGGCTCCAAC GCCCTCGCCA CCGGCAACGC CGTGGTGGCC GAGATGGCGC GCATCGGCAA GACCTTCCCG GAAGGGTTGA AGTACGGCAT CTACTACAAT CCCACCCAGT TCATCCAGCA GTCGGTGGAT GCGGTGGTGC ACACCATCGG CGAGGCCATC GTGCTGGTGG TGCTGGTGGT GATCCTGTTC CTGCAGACCT GGCGGGCGGC GATCATCCCC ATCCTCGCCA TCCCGATCTC GCTCATCGGC ACCTTCTTCG TCATGGGCCT GTTCGGCTTC TCGCTGAACA ACCTGTCCCT GTTCGGCCTG GTTCTGGCCA TCGGCATCGT GGTGGATGAC GCCATCGTCG TGGTGGAGAA TGTGGAGCGC AACATCGAGG CCGGGCTCTC CCCGCGCGAT GCCGCCTACA AGACCATGGA CGAGGTGGGC GGGGCGCTGG TGGCGATCTC GCTGGTGCTG TCGTCGGTGT TCGTGCCCAC GGCCTTCATC ACCGGCCTGT CGGGCGAGTT CTATCGCCAG TTCGCCCTCA CCATCGCCGG CTCGACCCTG ATCTCGCTTT TGGTGTCGCT GACCCTGTCG CCCGCCATGT GCGCGCTGCT GCTGAAGCCG CACCGCGCCG CCCACGAGAA GCCGGCCTGG TATGCCCGGC CGGTGGTGGG CTTCTTCGGG GTCTTCAACC GGGCCTTCGA GGGGCTCGGC AACGGCTATG CGTACCTGAC CGCGCGCCTG GTGCGGGTGG TGGCGCTGGT GCTGATCGTC TACGTGGGCA TCGTCGCCTT CGGCGGCTAC CTGTTCACCA CCACGCCTCA GGGCTTCATC CCGCAGCAGG ACCGCGGCTA TCTCATCATC GCCGCCCAGT TGCCCCCCGG CGCTTCCATG CAGCGCACCG AGACGGTGAT GAAGAAGGCC GGCGACCTGG TACTCGGCAC GCCGGGCGTC AGCCGCGTCA TCAACATCGC CGGCTTCTCC GGCGCCACCT TCACCAACGC GCCCAACGCC GGCGCCATGT TCGTGATCCT GAAGCCCTTC CCCGAGCGCG ACGGCCATCC CGAGCAGACG GCGGCGGCGG TCCAGAAGGT GTTGTTCGGC AAGATGGCGG GCATCCAGGA AGCCCAGATG ATCGTGGTGC AGCCGCCGCC GGTGCAGGGC ATCGGCAATG CCGGCGGCTT CCGCATGATG ATCGAGGACC GCTCCGGCGC GGGCCTGCTC GCCCTGCGCA ACGCCACCTA CGCCATGATG GGCGCCGCCG CCCAGACGCC GGGCCTGATG CAGGTCTATT CGCTGTTCGA GACCTCGACG CCCCAGCTGT TCCTCGACAT CGACCGGCAG AAGGCGCAGC TGCTGAAGGT CAACACCGCC GACCTGTTCG CGGCGCTGCA GACCTATATC GGCTCGTCCT ACGTCAACGA CTTCAACCTG TTCGGCCGCA CCTTCCGGGT GCAGGCCCAG GCCGACGCGC CGTTCCGCCT CGATCCGAAG GACGTGCTCT CCATCAGGGT GCGCACCGCG GGCGGGGAGA CGGTGCCGCT CGGCTCCTTC ACCACCGTGC GCGACATTTC CGGTCCCTAT CGCGTGCCGC GCTACAATCT GTATCCCGCG GCCGAGCTGG ACGGCTCGCC GGCGCCCGGA TACTCGCAGG GCCAGGCCAT CCAGATCATG CAGGAGCTGG CGGCGAAGGT GCTGCCGCAG GGCTTCTCCT ATGAATGGAC GGCGCTCGCC TACCAGCAGC AGAAGGCCGG CAACACCGCC ATCTTCGCCT TCGCCCTGGG CGTGCTGTTC GTGTTCCTGG TGCTGGCGGC CCAGTATGAG AGCCTGACCC TGCCTCTGGC TGTCATCCTC ATCGTGCCCA TGTGCCTGGT GGCCGCGCTT ATCGGCGTGA TCCTGAGGGG GCAGGACAAC AACATCCTGA CCCAGGTGGG CTTCATCGTG CTCATCGGCC TTGCCGCCAA GAACGCCATC CTCATCGTCG AGTTCGCCAA GCAGCTGGAA GACCAGGGCC ATGGCCGGCG CGAGGCTGCG GTGGAGGCGT CGCGGCTGCG GCTTCGGCCC ATCGTGATGA CCTCGCTCGC CTTCATCCTC GGCGTGGTGC CGCTGGTGTG GGCCACCGGG GCCGGCGCCG AGCTGCGGCA GGCGCTGGGC ACGGCGGTGT TCTCCGGCAT GATCGGGGTG ACGCTGTTCG GCCTGATCTT CACGCCCACC TTCTACGTCT TCGCCCGCTG GCTCGCCGGC CTCGGCGCGC GCCGCGAGAC CAAGGCCGAG CCGCCGCACC ACCCGGCCCC GGCCGAGTAG
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Protein sequence | MRFSHFFIDR PIFASVVSAV VMILGAVTYL RLPVAQYPDI APPVITVTGQ YPGASAEIVA ETVVAPIEQQ INGVEHMLYL ASNSTADGRF SISVTFDIGT NLDIAQVQVQ NRVAIAQPRL PSEVQQVGVV TAKSSPDLML VVSLYSPDGS RDPLFISNFA NIEIKDVLSR IDGVGSITVF GSREYAMQIW LDPDRLSQLN LTTTDVVAAL KAQNVQVASG VLNAPPVPEQ RAFQIAVRTL GRLSDARAFS DIVIKQTDQA LVRLKDVGRV EIAAQDYAST SFLDKDISIQ LGVFQRPGSN ALATGNAVVA EMARIGKTFP EGLKYGIYYN PTQFIQQSVD AVVHTIGEAI VLVVLVVILF LQTWRAAIIP ILAIPISLIG TFFVMGLFGF SLNNLSLFGL VLAIGIVVDD AIVVVENVER NIEAGLSPRD AAYKTMDEVG GALVAISLVL SSVFVPTAFI TGLSGEFYRQ FALTIAGSTL ISLLVSLTLS PAMCALLLKP HRAAHEKPAW YARPVVGFFG VFNRAFEGLG NGYAYLTARL VRVVALVLIV YVGIVAFGGY LFTTTPQGFI PQQDRGYLII AAQLPPGASM QRTETVMKKA GDLVLGTPGV SRVINIAGFS GATFTNAPNA GAMFVILKPF PERDGHPEQT AAAVQKVLFG KMAGIQEAQM IVVQPPPVQG IGNAGGFRMM IEDRSGAGLL ALRNATYAMM GAAAQTPGLM QVYSLFETST PQLFLDIDRQ KAQLLKVNTA DLFAALQTYI GSSYVNDFNL FGRTFRVQAQ ADAPFRLDPK DVLSIRVRTA GGETVPLGSF TTVRDISGPY RVPRYNLYPA AELDGSPAPG YSQGQAIQIM QELAAKVLPQ GFSYEWTALA YQQQKAGNTA IFAFALGVLF VFLVLAAQYE SLTLPLAVIL IVPMCLVAAL IGVILRGQDN NILTQVGFIV LIGLAAKNAI LIVEFAKQLE DQGHGRREAA VEASRLRLRP IVMTSLAFIL GVVPLVWATG AGAELRQALG TAVFSGMIGV TLFGLIFTPT FYVFARWLAG LGARRETKAE PPHHPAPAE
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