Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0750 |
Symbol | |
ID | 5876284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 776656 |
End bp | 778386 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641541096 |
Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
Protein accession | YP_001662391 |
Protein GI | 167039406 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGC TTTTATCGCT GTCTGGTGAC TATGGTTTCC TCGCAGTTTT AGTAGGAGAG GACGGTTATA TATTAGAGAC ATTAGGGAAC CACCAAGAAA CTATAGACCT AGCTCGAAGA ACCAATTTCA TTCCTGGCGC ATGCTGGCGA GAAGATAAAG TTGGCACTAA TGGTATAGGA ACTGCAATGG TTATAGGGCA AGCCCTTGAT GTAACTGGGG CTGAACACTT CTCTCGCGGA CTTCACTCTT GGACATGTAC TGGTTCTCCA ATTTTTAGTC CGGAAGGAAA ACCTATTGGA GTTATTGATC TTTCGGGACC TTGGTACCGA GAAAACAAAC TGGCATTAGC TACTATAGTA TCTTCTGCAA TTGCGATTGA AAACAATTTG AAGCAGAGTA AAGCCTTTAA AGAAACTTTA ACTTACAGAC AACTCTCAGA ATACTTCTTA GAAAACAACA GTGATCCCTT ATTAGTGATG GATAATACAG GAAGATTAAT CAAGGTTAAT TATGCATCTG AGAAAGTTTT GGGATGGAAA AAAGAAGATT TAATAGGACG AAGAGCTGAT GAAATATTTG ACAATTCGCA GGAAATCCTA TTCCTCATAA AAGCGCGGCA GAGTATAAAA GGCAAGGAAA TATTAGTGCA AAGTAAAAAA GGTATCTTGC GGTGTAGCGC AGATGTTTCA CCTATAAGTG GTTATTACAA TGAAAATGTA GCGGCTCTAA TAGCTCTAAA AATGCATGAA GGTAGTCAAT TTTATATAAG CTCTCCTCCA GCTTTAAAAG GATTCGAAGT AATATTAGGA AATCATCCCT GTTTGCGTGA AAGTATACGA TTAGCCCAAA TTGCAGCAAA TAGCGATGCA CCAGTCCTTA TTTTAGGAGA GACAGGGACA GGGAAAGACC TTTTTGCAAG AGCCATTCAT GAGGCTAGCG GTAGGAAAGG ACCTTTTGTG GCGATAAATG GTGGTGCTTT GCCGCGAGAA TTAATTGGAA GTGAGCTTTT CGGCTATGTA GGCGGAGCTT TTACCGGTGC ACGACCAGAG GGCAAGCCAG GTAAATTTGA ACAAGCACAA GGAGGTACTT TATTTTTAGA CGAAATAGGC GATATGCCTA TGGATATACA GGTTTACCTT TTACGAGTGT TAGAAGAAAA AAAGGTAGTT CGAATAGGCG GGCATAAGGA GATACCGTTA GATGTTCGAA TTATTGCTGC GACCAATTCG GATTTAACGA AGTTAGTAAG AGAGAAAAAA TTCCGAGAGG ATTTGTATTT TCGCCTGAGA GTTCTCACTA TTCATTTATG CCCGTTACGA GAACGCAAAA GTGATATACC TCTTCTTTTT CAACATTTTA TTCATAAATT TTCACAAAAA TTAGGTAAAA ATATTACCAA TATTGATCCA TCAATTTGGC CTTTATTAGG GAATTATGAC TGGCCAGGGA ATATTAGGGA ATTACGAAAT GTGGCAGAAT GGGCAGTGAA TATAGCAGAG GTTAATACAA TTTCTGTTAG TCATTTGCCG TCTTACTTAT CTGGTTCTCA AACTATCCGC GAGAACAGTA ATAGCTTTTC TTCTACCTCT CTTATTGAAC TGGAAAAGCA GGAGATTAGT CAACTTCTCG AACATTATGG AGGTAATATA ACTAAAGTTG CTAAAGCCTT AGGCATAGCA CGGAACACCT TGTATAGGAA GCTTTATAAA TATGGACTAA AGACTCGTTA G
|
Protein sequence | MEKLLSLSGD YGFLAVLVGE DGYILETLGN HQETIDLARR TNFIPGACWR EDKVGTNGIG TAMVIGQALD VTGAEHFSRG LHSWTCTGSP IFSPEGKPIG VIDLSGPWYR ENKLALATIV SSAIAIENNL KQSKAFKETL TYRQLSEYFL ENNSDPLLVM DNTGRLIKVN YASEKVLGWK KEDLIGRRAD EIFDNSQEIL FLIKARQSIK GKEILVQSKK GILRCSADVS PISGYYNENV AALIALKMHE GSQFYISSPP ALKGFEVILG NHPCLRESIR LAQIAANSDA PVLILGETGT GKDLFARAIH EASGRKGPFV AINGGALPRE LIGSELFGYV GGAFTGARPE GKPGKFEQAQ GGTLFLDEIG DMPMDIQVYL LRVLEEKKVV RIGGHKEIPL DVRIIAATNS DLTKLVREKK FREDLYFRLR VLTIHLCPLR ERKSDIPLLF QHFIHKFSQK LGKNITNIDP SIWPLLGNYD WPGNIRELRN VAEWAVNIAE VNTISVSHLP SYLSGSQTIR ENSNSFSSTS LIELEKQEIS QLLEHYGGNI TKVAKALGIA RNTLYRKLYK YGLKTR
|
| |