Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0193 |
Symbol | |
ID | 5875664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 194810 |
End bp | 195241 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641540536 |
Product | nickel responsive regulator |
Protein accession | YP_001661848 |
Protein GI | 167038863 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0129549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGTGA TAAGTCTGGA AGAAATAACA CGTTTTGGAG TTTCAATGGA ATCAAAACTT CTTTATCAAT TTGACGAGCT TATAAAGAAA AAAAATTACA ACAACAGGTC TGAAGCTATA CGAGATTTGA TAAGAGATTT TATCGTGGAA AATCAGTGGG AAGCAGAGGA TGTAGAAACT ATTGGAACAA TTACTTATGT TTTTAATCAT GAAGTGAGGG AAATAAGTGA CAAACTGACA GATATGCAAC ACAAGCACTA TCAAAACATA ATCTCAACAA TGCACGTACA CTTGGATAAG CACAACTGCC TCGAAGTAAT GGTAGTAAAA GGCACTTCAA AAGAAATTAC AAAAATTGCA GATGAAATTA TAAGCACAAA AGGAGTAAAG CATGGAAAAC TGGTAATGAC AACAACAGGT GAAAATTTGT AA
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Protein sequence | MGVISLEEIT RFGVSMESKL LYQFDELIKK KNYNNRSEAI RDLIRDFIVE NQWEAEDVET IGTITYVFNH EVREISDKLT DMQHKHYQNI ISTMHVHLDK HNCLEVMVVK GTSKEITKIA DEIISTKGVK HGKLVMTTTG ENL
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