Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0054 |
Symbol | |
ID | 4242437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 76285 |
End bp | 76875 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105422 |
Product | signal transduction protein |
Protein accession | YP_720041 |
Protein GI | 113473980 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5635] Predicted NTPase (NACHT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.888288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACTC AAGCAGATCC AAACCTAAAT ATTTCTAAGA CTGGATTAGA AGCAAATTTT TTTATTCTAG AAAAACGATC TTTCAAGAAT AGACCTGATT TACTTCCAGA AAGTTCAGAA AATAATTTAC CTAATGAAAA GCCTTTTGAG ACTCTTTATG ACGCATTTGA GAGATATAAG CGTTTAGTAC TTTTGGGAGA ACCGGGAGCT GGAAAAACAG TAGCTTTACA AGAATTTAAG AAAAATATAT CTAAGAAAGA GAGACAGGCA GAAAATAATA GCCTGGTTAT ATTTGTATCC ATTCAAAAAT GGAAGTACCC AGCAGATATT GTTACGTTTT TAGCTAAAGA GATTGGTAAA ATAGAGGAGG ATTTCCGGAA AGAAATACAA ACAAAAAGAC TTTTATTACT TTTGGATGGA TTAGATGAGT TACCTTCTAA TGTGTCAAAA AGGTCAGAAA GCAGAGATGC AGAAATCATA GACTATCGCG TTCATTTTCT CTCGAAGTTA TCAGATTTTT TAAGAAATTT AAATCCCAAT AATATTTCAA TTGTGATGAC TTGTCGTAAC GGGACTTTAG TGAAAAAATA G
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Protein sequence | MVTQADPNLN ISKTGLEANF FILEKRSFKN RPDLLPESSE NNLPNEKPFE TLYDAFERYK RLVLLGEPGA GKTVALQEFK KNISKKERQA ENNSLVIFVS IQKWKYPADI VTFLAKEIGK IEEDFRKEIQ TKRLLLLLDG LDELPSNVSK RSESRDAEII DYRVHFLSKL SDFLRNLNPN NISIVMTCRN GTLVKK
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