Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0036 |
Symbol | ispG |
ID | 6091435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 30604 |
End bp | 31638 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642487215 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001738081 |
Protein GI | 170287843 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA GTGTGAAAGT CGGGAACGTG GTGATCGGAG GAGGCGCCCC CGTGAGTGTT CAGTCTATGA CCACGACGAA GACGGCCGAC GTGGAAAGAA CCATCTCCCA AATAAAACGC CTTGAAAGGG CTGGTTGTGA GATCATTCGG GTGGCCGTTC AAGATGAAGA AGATGCGAAA GCAATCAGAC GAATAAAGGA ACAGATAGAG ATTCCCCTTG TTGCGGATAT TCAGTTCGAT TACAGGCTTG CTATTCTTTC GATTGATAAT GGAGCAGACA AAATAAGGAT CAATCCAGGT AATATGAGTA GGGATCGGCT GAAGGATGTC GTCGCGGCTG CGAAAGGAAA AGGCATTCCC ATTCGTGTTG GAGCGAACGT GGGATCCATA AAGAGAAGAA CCTCAGAAAG GTGGAAAGAT CTGGCAGAAT CCGCTCTCGA GGAAGTCAGA CTACTCGAGA AGGAAGGGTT CTATGATATC GTCGTCTCGG TGAAGAGCTC AGATATACTC GAAACGATAA AGGCGAACGA GTACATTGCT GAAAAGATCG AATATCCCAT CCATCTTGGG GTGACCGAGG CGGGAGTTTC GGAAACGGCC GTTGTTAAAT CCTCCATTGC TATAGGTCAT CTCCTTCTGA AAAACATAGG TGACACCATA AGGGTATCCA TATCTGGAGA TCCAGTGAGG GAGGTTATCG TCGGAAAGAA AATCCTCATA GCCCTCGGTC TCAGGGAAGG TGTGGAGGTG ATAGCCTGCC CCACTTGTGG CAGAGCAGAA ATAGATGTCG AAAACATGGC GAAGATGATC GAAGAGAATT TCTTTCACGT TCAAAAGAGA TTGAAAATAG CTGTTATGGG ATGTGTTGTG AACGGTATTG GAGAAGGAAA AGATGCCGAT CTGGGAGTGG CCGGTCTCAG GGATGGAGCT GTTATATTCG TGAAGGGAGA GATAAAAGAA CGTGTTTCAA AAGAGTTCGT TCTGGAACGT CTCAAACACT ATCTGAATGA ACTACTCGAG GAGGTGGAAC GATGA
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Protein sequence | MRKSVKVGNV VIGGGAPVSV QSMTTTKTAD VERTISQIKR LERAGCEIIR VAVQDEEDAK AIRRIKEQIE IPLVADIQFD YRLAILSIDN GADKIRINPG NMSRDRLKDV VAAAKGKGIP IRVGANVGSI KRRTSERWKD LAESALEEVR LLEKEGFYDI VVSVKSSDIL ETIKANEYIA EKIEYPIHLG VTEAGVSETA VVKSSIAIGH LLLKNIGDTI RVSISGDPVR EVIVGKKILI ALGLREGVEV IACPTCGRAE IDVENMAKMI EENFFHVQKR LKIAVMGCVV NGIGEGKDAD LGVAGLRDGA VIFVKGEIKE RVSKEFVLER LKHYLNELLE EVER
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