Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3374 |
Symbol | |
ID | 5200341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3701948 |
End bp | 3703714 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582920 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_001263858 |
Protein GI | 148556276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0635082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGTC AAGCGGACCC CTCCGGCATT TTTTCGCCGA TTGGCGAACG CGCCTCTTCC CGGCGGTGCG GCGGTCGCGA TATGGGGGAG CGTCCGTGTG GTTCAAGCTG GGTGATGCGT AAACTTATCC CGTTCAAATA CCCGGCGATC GCATTCGGCC TGGGGCTCGC CTCGGCGCTC GGTTTCGCGC CGCTCAACTG GTGGTTCGTC ACGCTGCTGT GCATGGCGGG GCTGATGGCG CTGCTGCTCG ACGCGCCGCG GGCGCGCGAC GTGGCGTGGC GGGGCTGGTG CTTCGGCGTC GGCCACTTCA CCTTCGGCAA CAACTGGATC GCCACCGCCT TCACCTTCCA GGACGCGATG CCGCATTGGC TGGGGGGCAT CGCCGTCTTC CTGCTCGCGC TCTACCTCGC GGTCTTCCCG ATGCTCGCCG GGCTCGGCGC CTGGGCGCTC AACCGGCTGC CGCGGCTGGC GCAGGCGCGG CGCAATCGGA TCGAGCGCGA CCAGCGGCTG AGCAAGCTCA AGGGCCTGAT CCCCGCCGGA ATGGAGCCGC AGGCGGCGAC GGCGCCGGTC GCGGCGCCCA GCCCCTTCGC CTTCATCCCG CTGTTCGCCG GCTGCTGGAT CGCCGCCGAA TATCTGCGCA GCATCGCCTT CACCGGTTTC GCCTGGAACC CGCTCGGCGC GGTGATGGTC GCGCCAGGCA CAGCCGAGCC GGCCTGGATC GGCCTCACCC GGCTGGTCGG CACCTACGGC CTGTCGGGCT GGGTGGTGCT GCTGTCGGGC ATCTGGCTGC TCGCCGTGCT GCCGGGCACG AAGCGCCAGC GCTGGCAGCG GGTCGGCGTG GCGCTGCTCG TCGCGATGCT CGCCCAGATC CTGTCGGCCT GGCTGCTGCG CCCGCCGCCG CCGCGCGCCG GGCCACGCAT CCTGGTCGTC CAGCCGAACA TCAACCAGAA CGAGAAATGG GACCCGAAGC TCCAGCTCGC CAATTTCCGC CGGCTGAGCG AGCTGAGCGG CAAGCCCGGC CCACAGCCGC GGCTGATCCT CTGGCCCGAG GCGGCGACCG CGGACTTCCT CGAGCTCGAC CCTCCGGCGC GGTCGCGGAT CGCCGGCCTG CTCGGGCCCA GGGACAAGGT CCTGCTCGGC GGCGACGCGT TGATCTTCGA CAAGGCGGGC GAGCTGGCCG GCGCGCACAA CAGCCTGTTC GCGCTCGACG CGCGCGGCGA CATCCTCGGC CGCTACGACA AGGCGCATCT CGTCCCCTAT GGCGAATATC TGCCGGCGCG CACGATCCTG TCGGCGATCG GCCTGTCGCG ACTGGTGCCC GGCGACGTCG ATTTCTGGTC GGGGCCCGGT CCGGCGACGA TGACGGTGCC CGGCTTCGGC AAGGCCGGCA TCCAGATCTG CTACGAGATC ATCTTCTCGG GCCAGGTCGT CGACGCGCGC AACCGTCCCG ATTTCCTGTT CAATCCCTCG AACGACGCCT GGTTCGGCCG CTGGGGCCCG CCGCAGCACC TCGCCCAGGC GCGGCTGCGC GCCGTGGAGG AGGGGCTTCC CGTGATCCGC TCGACGCCGA CCGGCATCTC GGCGGTGGTC GATGCCGACG GGCGGCTGCT CCACAGCCTT CCCTGGCACC AGGCGGGCGC GATCGACGCG GTGCTGCCGC CGCCGCGCCC GGCGACGCCG TTCGCGCGCT TCGGCAACCT GCTGCCGCTG CTGTTCGCGG CGTTGCTGGT CGCGGGTGGA ATTGCCATCG CCTTCAAGCG CCGCTAA
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Protein sequence | MGCQADPSGI FSPIGERASS RRCGGRDMGE RPCGSSWVMR KLIPFKYPAI AFGLGLASAL GFAPLNWWFV TLLCMAGLMA LLLDAPRARD VAWRGWCFGV GHFTFGNNWI ATAFTFQDAM PHWLGGIAVF LLALYLAVFP MLAGLGAWAL NRLPRLAQAR RNRIERDQRL SKLKGLIPAG MEPQAATAPV AAPSPFAFIP LFAGCWIAAE YLRSIAFTGF AWNPLGAVMV APGTAEPAWI GLTRLVGTYG LSGWVVLLSG IWLLAVLPGT KRQRWQRVGV ALLVAMLAQI LSAWLLRPPP PRAGPRILVV QPNINQNEKW DPKLQLANFR RLSELSGKPG PQPRLILWPE AATADFLELD PPARSRIAGL LGPRDKVLLG GDALIFDKAG ELAGAHNSLF ALDARGDILG RYDKAHLVPY GEYLPARTIL SAIGLSRLVP GDVDFWSGPG PATMTVPGFG KAGIQICYEI IFSGQVVDAR NRPDFLFNPS NDAWFGRWGP PQHLAQARLR AVEEGLPVIR STPTGISAVV DADGRLLHSL PWHQAGAIDA VLPPPRPATP FARFGNLLPL LFAALLVAGG IAIAFKRR
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