Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1356 |
Symbol | |
ID | 5200805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1503035 |
End bp | 1505107 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640580903 |
Product | elongation factor G |
Protein accession | YP_001261859 |
Protein GI | 148554277 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.442943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0310801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA GCCACCCGCT CGAGAAATAT CGCAATATCG GCATCATGGC CCACATCGAT GCCGGCAAGA CGACGACGAC CGAGCGTATC CTCTACTACA CCGGCAAGTC CTACAAGATC GGCGAGGTCC ATGAGGGCAC CGCGACGATG GACTGGATGG AGCAGGAGCA AGAGCGCGGG ATCACGATCA CGTCGGCCGC GACGACCTGT TTCTGGAACG ACCACCGGAT CAACATCATC GACACCCCCG GCCACGTCGA CTTCACCATC GAGGTCGAGC GTTCGCTGCG CGTGCTCGAC GGCGCCGTGA CGGCGTTCGA CGGCGTCGCC GGCGTCGAGC CGCAGTCGGA GACGGTGTGG CGCCAGGCCG ACAAGTACCG CGTCCCGCGC ATGTGCTACG TCAACAAGCT CGACCGCACC GGCGCGAACT TCCAGCGCTG CGTCCAGATG ATCAAGGACC GCCTCGGCGC GCGTCCGGCC GTCCTCTATC TCCCGATCGG CATCGAGAGC AGCTTCGTCG GCCTCGTCGA CCTGGTCGAG AACCGCGCGA TCGTCTGGCT CGAGGAGAGC CTGGGCGCGA AGTTCGAATA TCGCGACATC CCGGACGACA TGAAGGATGA GGCCGCCGTG GCCCGCCAGG AGCTGATCGA GCTTGCCGTC GAGCAGGACG AGGCGGCGAT GGAATCCTAT CTCGAGGGCA ACGAGCCCGA CGTCGCGACC CTGAAGGCGC TGCTGCGCAA GGGCACGCTG GCGTTCGACT TCGTCCCCGT GCTGTGCGGC TCGTCGTTCA AGAACAAGGG CGTCCAGCCG CTGCTCGACG CCGTCGTCGA CTATCTGCCG AGCCCGCTCG ACATTCCCGA CGTGCAGGGC GTCAAGCTCG ACGGCGAGAC CCCGGACTCG CGTCCGGCCG AGGACTCGGC GCCGATGTCG GCGCTGGCCT TCAAGATCAT GAACGATCCG TTCGTCGGCT CGCTCACCTT CGCGCGCATC TATTCGGGCA AGCTCGAAAA GGGCACCTAC CTGAACAGCG TGAAGGACAA GAAGGAAAAG ATCGGCCGCA TGCTGCTGAT GCATGCGAAC AGCCGCGAGG ACATCGAAGA GGCCTATGCG GGCGACATCG TCGCGCTGGC TGGCCTCAAG GAGACCACCA CCGGCGACAC GCTGTGCGCG CCGTCGGCGC CGATCATCCT CGAGCGGATG GAGTTCCCGG ACCCCGTCAT CGAGCTGTCG GTGGAGCCGA AGACCAAGGC CGACCAGGAG AAGATGGGCA TCGCGCTCAA CCGCCTGGCC GCCGAGGACC CCTCGTTCCG CGTCTCGTCC GACCACGAGT CCGGCCAGAC CATCATCAAG GGCATGGGCG AACTCCACCT CGAGATCCTC GTCGACCGCA TGAAGCGCGA GTTCAAGGTC GAGGCGAACG TCGGCGCGCC GCAGGTCGCC TATCGCGAAT ATCTCAAGAA GCCGGTCGAG CTGGTCTACA CCCACAAGAA GCAGTCGGGT GGTTCGGGCC AGTTCGGTGA GGTCAAGGTC CAGGTCAAGC CGGGCGAGCG CGGCTCGGGC TTCGTCTTCG TCGACGAGGT CAAGGGCGGC AACATCCCGC GTGAATATAT CCCGTCGGTC GAGAAGGGCA TGCGCGAGAC CGCCGAGGGC GGCTCGCTGA TCGGCTTCCC GATCGTGGAC GTCGAAGTCC ACCTGATCGA CGGCAAGTAT CACGACGTCG ACTCGTCGGC GCTCGCCTTC GAGATCACGG GCCGTGGCGC GATGCGCGAG GCGGCCCAGA AGGCCGGCAT CACCATCCTC GAGCCGATCA TGAAGGTCGA GGTCGTGACG CCGGAGGATT ATCTGGGCGA CGTGATCGGC GACATGAACA GCCGCCGTGG CCAGATCCAG GGCACCGACA GCCGGGGCAA CGCCCAGGTC GTCGAGGCGA TGGTCCCGCT GGCGAACATG TTCGGCTACG TGAACCAGCT CCGCTCGTTC ACCCAGGGCC GTGCGCAGTA CAGCATGCAG TTCTCGCACT ATGACGAAGT CCCGGCGAAC GTCGCGGACG AGGTCAAGGC AAAGCTGGCA TAA
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Protein sequence | MARSHPLEKY RNIGIMAHID AGKTTTTERI LYYTGKSYKI GEVHEGTATM DWMEQEQERG ITITSAATTC FWNDHRINII DTPGHVDFTI EVERSLRVLD GAVTAFDGVA GVEPQSETVW RQADKYRVPR MCYVNKLDRT GANFQRCVQM IKDRLGARPA VLYLPIGIES SFVGLVDLVE NRAIVWLEES LGAKFEYRDI PDDMKDEAAV ARQELIELAV EQDEAAMESY LEGNEPDVAT LKALLRKGTL AFDFVPVLCG SSFKNKGVQP LLDAVVDYLP SPLDIPDVQG VKLDGETPDS RPAEDSAPMS ALAFKIMNDP FVGSLTFARI YSGKLEKGTY LNSVKDKKEK IGRMLLMHAN SREDIEEAYA GDIVALAGLK ETTTGDTLCA PSAPIILERM EFPDPVIELS VEPKTKADQE KMGIALNRLA AEDPSFRVSS DHESGQTIIK GMGELHLEIL VDRMKREFKV EANVGAPQVA YREYLKKPVE LVYTHKKQSG GSGQFGEVKV QVKPGERGSG FVFVDEVKGG NIPREYIPSV EKGMRETAEG GSLIGFPIVD VEVHLIDGKY HDVDSSALAF EITGRGAMRE AAQKAGITIL EPIMKVEVVT PEDYLGDVIG DMNSRRGQIQ GTDSRGNAQV VEAMVPLANM FGYVNQLRSF TQGRAQYSMQ FSHYDEVPAN VADEVKAKLA
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