Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0872 |
Symbol | |
ID | 5197171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 965410 |
End bp | 966318 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580417 |
Product | hypothetical protein |
Protein accession | YP_001261377 |
Protein GI | 148553795 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.128408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.238224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACACA GAAAAGTACC CAAGCGCGTC TTCCCCCGGG CCAAGGAGGA TGCGGCGGTC GCCAAGACCG CCACCGAAAC CCCGCAGACC ACCGACAGCG CGTACAAGCT CGCCTTCCAG GACACCGACT TCCTGCTGCG CGACGACCTG CGCCCGGTGC GCTTCCAGCT GGAGCTGCTG AAACCCGAGC TGCTGCTCGA GGAAGCGAAC ATCGGATCGA CCTTCGTGAT GTACGGTTCG GCCCGCATCC CCGAGCCGGG CAAGGCCGAG GCGCTGGTCA AGTCGGCGGT CACCCCCAAG CAGCGGCGGA TCGCCGAGCG GCTGCAGGCC AAGAGCCGCT ATTATGACGA GGCGCGCAAG CTGGCCCAGA CCGCCAGCCA GTGCCCGCTC GACGCCGACG GCAAGCGCCA GTTCGTCGTC TGCTCGGGCG GCGGCCCGTC GATCATGGAA GCCGCCAATC GCGGCGCGCA CGACGTCGGC GCGGAATCGA TCGGCCTCAA CATCGTCCTG CCGTTCGAGC AGACGCCGAA CGCCTATGTG ACGCCGCATC TGAGCTTCCA GTTCCATTAT TTCGCGCTGA GGAAGATGCA CTTCCTGCTG CGCGCCCGCG CGGTCGCGGC CTTCCCGGGC GGCTTCGGCA CCTTCGACGA GCTGTTCGAG CTGCTCACCC TGGTCCAGAC CGGCAAGATG GCGCAATTGC CGATCTTCCT GTTCGGCCAG GACTTCTGGC GCAGGGTGCT CGACTTCGAC GCGCTGGTCG AGGAAGGCGT GATCGGCGAG AACGACCTCA ACCTGTTCCG CTTCGTCGAA ACGGCGGAGG AGGCGTGGGA GAAGCTCAAC CTCTATTACG CCACCCGCGA ACGCTCCTAT CGCCATCGCG ATCCATCCAC ACAGGCGGCG GCGGGTTGA
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Protein sequence | MAHRKVPKRV FPRAKEDAAV AKTATETPQT TDSAYKLAFQ DTDFLLRDDL RPVRFQLELL KPELLLEEAN IGSTFVMYGS ARIPEPGKAE ALVKSAVTPK QRRIAERLQA KSRYYDEARK LAQTASQCPL DADGKRQFVV CSGGGPSIME AANRGAHDVG AESIGLNIVL PFEQTPNAYV TPHLSFQFHY FALRKMHFLL RARAVAAFPG GFGTFDELFE LLTLVQTGKM AQLPIFLFGQ DFWRRVLDFD ALVEEGVIGE NDLNLFRFVE TAEEAWEKLN LYYATRERSY RHRDPSTQAA AG
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