Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1435 |
Symbol | |
ID | 3763370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1500993 |
End bp | 1502726 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | nickel-dependent hydrogenase, large subunit |
Protein accession | YP_393947 |
Protein GI | 78777632 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.611833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA GAGTAATAGT AGATCCAATA ACAAGGATAG AAGGGCATCT AAGAGCTGAG GTAATAGTTG GAGATGATGG AGTTGTTCAA GACGCATTTG TATCTTCAAC TCTATGGAGA GGTTTAGAGG TAATCGCCAA AGGTAGGGAT CCAAGAAATA TACCGCTTAT GATGCAGAGA ATTTGTGGAG TTTGTACCTA CTCCCACTAT CTAAAGAGCA CAATGGCAGT AGAGGATGCA CTGGGAATTA AAATTCCTTA CAATGCAGAA CTTGTAAGAA CTTTGATGAA TGCGGCACTT TTTATGCATG ACCATGTTGT GCATTTTTAT CATCTACATG GTGTTGACTG GGTTGATATA GTCTCAGCAC TCTCTGCGGA TGAAGAAAAG GCTAGTAAAT TAGCTTTTAA ATATAGTGAC AATCCAATCG GAACTGGTGA GAATGAGCTT AAAAAAGTAA AAGAAAAAAT TGCAAAATTT GCTAAAAATC CTCAAGGACT TGGACCTTTT GCTAACGCAT ATTGGGGGCA TAAAACATTT AGATTTACAC CTGAACAAAA TCTTATTGCA CTTTCGCACT ACTTAAAAGC TCTTGAAATT CAAAGAATAA TAGCGCAGAT GATGGCAATC TTTGGTGGTA AAAATCCACA TCCTCAGAGT TTGGCAGTAG GTGGAGTTAC TTGTGTTATG GATATTCTTA ACCCTGCTAG AATGGGTGAG TATTTAGTTA AATATCAGAC TATTGCAGAC TTTGTAAATA ATGCTTACTA TGCAGATATC GTAATGGCGG CAGAGATGTA CAAAACTGAG CCTTCTGTTA TGAAACCTAT GGGTGTTAAA AACTTTATGG CACATCAAGA CATGATGGTT GGCAGAAATG ATTATCTTTT TGAGAGTGGC GTTATCATGA ACGGGGATCT TAGTAAAGTA TTTGAGATTG ATGAAGATAT GATAACTGAA GAAGCAACTC ACTCATGGTA TAAAGATGAT GCACCGCAAC ACCCTTATGA TGGAACAACA AATCCAAACT ATACTGGTTT TGTAGATGGC GATACTGTTG GACCTGATGG AAAAATGATT AGCTCTAAAA TGATAAATGA AAAAGAGAAG TACAGCTGGA TTAAATCGCC AAGATATAAA GGTGAGCCTA TGGAAGTTGG TCCTTTAGCA TGTATGTTAG TCGGTTATGC AAAAGGAAAC AAAAAAACAG TAAAAGTAGT AAATGATTTC TTAGCTAAAA CAGGTGTTCC AGCAGCTGCT CTTTTTTCAA CACTTGGAAG AACAGCAGGG CGAATGTTGC AGGCAAAACT AATTGCAGAT AACGCTCTAG TTGCTTTTAA TAACTTAATA GAAAATCTCA AAGTTGACCA AGAGACTTGT GCAACTTACA CTATAGACAA AAACAGAGAG TACAAAGGAA GAGGTATGGG TGATGTACCT CGTGGAATGC TTAGTCACTG GATTAGAATT AAAAATGGTG TTGTTGAAAA CTATCAAGCA GTAGTTCCAT CAACTTGGAA TGCAGGACCA ATGGACTCTA AAGGTGCAAA AGGACCTTAT GAAGCTGACT TAATCGGTCT AAAAATAGAG GATTTAACAC AGCCAATAGA GATAATTAGA ATTATTCATT CTTATGATCC GTGTATCGCA TGTGCAGTAC ATGTAATGGA TACAAAAGGC AAAATACTAA GCCAGTATAA GGTGGACCCG CTTTATGGCG GATGCACTAT TTAA
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Protein sequence | MSKRVIVDPI TRIEGHLRAE VIVGDDGVVQ DAFVSSTLWR GLEVIAKGRD PRNIPLMMQR ICGVCTYSHY LKSTMAVEDA LGIKIPYNAE LVRTLMNAAL FMHDHVVHFY HLHGVDWVDI VSALSADEEK ASKLAFKYSD NPIGTGENEL KKVKEKIAKF AKNPQGLGPF ANAYWGHKTF RFTPEQNLIA LSHYLKALEI QRIIAQMMAI FGGKNPHPQS LAVGGVTCVM DILNPARMGE YLVKYQTIAD FVNNAYYADI VMAAEMYKTE PSVMKPMGVK NFMAHQDMMV GRNDYLFESG VIMNGDLSKV FEIDEDMITE EATHSWYKDD APQHPYDGTT NPNYTGFVDG DTVGPDGKMI SSKMINEKEK YSWIKSPRYK GEPMEVGPLA CMLVGYAKGN KKTVKVVNDF LAKTGVPAAA LFSTLGRTAG RMLQAKLIAD NALVAFNNLI ENLKVDQETC ATYTIDKNRE YKGRGMGDVP RGMLSHWIRI KNGVVENYQA VVPSTWNAGP MDSKGAKGPY EADLIGLKIE DLTQPIEIIR IIHSYDPCIA CAVHVMDTKG KILSQYKVDP LYGGCTI
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