Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3783 |
Symbol | |
ID | 8884983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4040027 |
End bp | 4040827 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003512533 |
Protein GI | 291301255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000654958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGACA ACGCCCACCC CGTGCGGCTG TCCGCCCGCG ACCTGACCCT GCGCTACGGC GACCGGGTGG TGGCCACCGG TCTGAGCCTC GACATCCCCG ACCGGGCGTT CACCGTGATC GTCGGACCCA ACGCCTGCGG CAAGTCCACA CTGCTGCGAG CCCTGGTGCG ACTGCTGCGC CCCGCCGAGG GCTCCGTCCG GCTCGACGAG GCCGACCTGG CCGCGCACCC GGCGAAACAA CTGGCCCGGA CCCTGGGCTT CCTGCCGCAG GATCCACTGT CGCCGGACGA CATCAAGGTG CGGCAACTGG TCGCGCGGGG CCGGTACCCG CACCAGTCGG CGCTGTCGCT GTGGTCGCGC GCCGATGAGG AGGCCGTCGC CGAGGCCATG GCCACCGCCG GAGTCGCCGA CCTGTCCGAA CGGCTGGTCA CCGAACTGTC GGGCGGGCAG CGGCAACGCG TGTGGGTGGC GATGGTGCTG GCGCAGCAGA CCCCCTACCT GCTGCTGGAC GAGCCGACCT CGTTCCTGGA CCTGGCGCAC CAGTACCGGT TGCTGGACCT GCTGGCCCGG CTGCGCGACG AGGGCCGCAC CGTCATCGCG GTCCTGCACG ACATCAACCA GGCCTGCCGC TACGCCGACC ACCTGATCGC CATGAAGGAC GGACGCGTCG TCGCCGAGGG CCCCGCCAAG ACCATCGTGG ACGCCGAACT CGTCGACGAC GTCTTCGACC TCCCCAGCGT CGTGGTCGAC TGCCCGACCA CCGGAGCCCC GATGGTGGTT CCCGAACCGG GACACCGGTA A
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Protein sequence | MNDNAHPVRL SARDLTLRYG DRVVATGLSL DIPDRAFTVI VGPNACGKST LLRALVRLLR PAEGSVRLDE ADLAAHPAKQ LARTLGFLPQ DPLSPDDIKV RQLVARGRYP HQSALSLWSR ADEEAVAEAM ATAGVADLSE RLVTELSGGQ RQRVWVAMVL AQQTPYLLLD EPTSFLDLAH QYRLLDLLAR LRDEGRTVIA VLHDINQACR YADHLIAMKD GRVVAEGPAK TIVDAELVDD VFDLPSVVVD CPTTGAPMVV PEPGHR
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