Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2407 |
Symbol | |
ID | 8726151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2903064 |
End bp | 2904263 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003387226 |
Protein GI | 284037296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.411749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCC TTCCTGTTCA CCTTGACCTC TTTGCCCTTA TTATCCTGCT GGGTGTGGCG CAGGGAGTTT TTCTGGGCGT TTTTTTTCTA ACTGGTCAGC GGGCAAACCG GGTAGCAAAT CGCTGTCTGG GCTTCTTCAT GCTGGCATTA TCCGCTATTA GTGGTGAGAT ATTTCTGAAT TACACGAACT ACACGTTTCG GGTACTCTGG ACCAGCGATT TTGCGGAGCC CTTCAATTTT GCCATCGGGC CGTTGTTTTA CTTCTTTGTG TATGGACGAA TCCGACAGCG ATTACCGCGT TTTTGGGGCT GGCATTTACT GCCATTTGTT ATCTGGCTGG TTAACTCAAT TACCTGGCAT TACCAGCCAG TAGAAGTCAA ATACAATGCG TACATCAACG CCCAGCATCC CGAATTACCG TTTATTCATC AGCAGCCGTA TTGGCAGGAT GATTTTACGG GGCTTCGGGA TTTTGTGGAT GAGATGACCT TGCTGAGCTG CGTGGTGTAT GCTGTACTGG CTCTTCTGAC CATTCGAACG GCTAATCGCA CAGCGAGTAA AAAAACGGAT TCCTCAATAC ATACGTCATT ACGCTTATTA AGTTTACTCT TCGCGTTAGT ACCCTTCCTG ATCGTGCTGG TAAAGCCTCA GTTTTACCAC GATGTAGGCG ATTATCTGCT GGCTACGTAC ATGGCTGCTA CCATCTACGC AATCAGTTTT CTGGTAATGC AGGAGTCGGA TTTTTTGCTG AACACGGCAC AAGCTGCACC AACAGTCTTT GCGGAAGAGT CCCTGGCGGA ATCGAAAAAG AAATATGAAA AGTCGGCGCT GTCGGAAGAG GTCGAGGATG CCGTTTTGCG TAAACTCGCC CGCCTGCTCG AAACGGAGAA ACCCTACCTC GATAGTGATT TGTCTTTACC GAAACTAGCC GCCCGGCTGG ATACCAGTCC GCATCATCTA TCTCAATTAC TCAACGACCG GCTCGGGCAA ACGTTCTTCG ACTGGCTGGC TGCCTACCGT ATTGCCGAGG CCCGGCAACT ACTCAGCGAA CCGGCTACCA GTCACCTGAA AATCGACGAA ATTGCCGAAC GGGTAGGGTA CAATTCGCCG TCTGCTTTCC ATACGGCCTT CAAACGATTG ACCAACCAGA CACCGGCGCA GTTTCGGGCT AAAGGGCTTG GGCAGGGGGC CGAGCGGTAG
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Protein sequence | MQTLPVHLDL FALIILLGVA QGVFLGVFFL TGQRANRVAN RCLGFFMLAL SAISGEIFLN YTNYTFRVLW TSDFAEPFNF AIGPLFYFFV YGRIRQRLPR FWGWHLLPFV IWLVNSITWH YQPVEVKYNA YINAQHPELP FIHQQPYWQD DFTGLRDFVD EMTLLSCVVY AVLALLTIRT ANRTASKKTD SSIHTSLRLL SLLFALVPFL IVLVKPQFYH DVGDYLLATY MAATIYAISF LVMQESDFLL NTAQAAPTVF AEESLAESKK KYEKSALSEE VEDAVLRKLA RLLETEKPYL DSDLSLPKLA ARLDTSPHHL SQLLNDRLGQ TFFDWLAAYR IAEARQLLSE PATSHLKIDE IAERVGYNSP SAFHTAFKRL TNQTPAQFRA KGLGQGAER
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