Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3183 |
Symbol | |
ID | 4253753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3802648 |
End bp | 3803277 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119824 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_735310 |
Protein GI | 113971517 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.413955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.024534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCT TATATGGCAC ACCACGCAGC CGAGCATTAC GAGTCTCTTG GGTGTTAGAA GAGTTAGGCG CCGAATGGGC CTTTTCGTTT GTGGATATGA ATAAGGGCGA GCACCGTAGC GCCGCTTTCT TAGCGCTCAA TCCCTGCGGC AAAGTGCCAG TGTTAACCGA TGATAATCTA GTTTTATCTG AGTCGGCGGC CATTTGCCTG TATCTGGCGG AGAAATTTGG CCAGTTGTTA CCTGCGCCGG GCACTACTGC ATCGGGTCTG CATCATCAAT GGGTTAGCTT TATTATCACC GAACTCGAGC AGCCACTGTG GACAATGGGC AAACATAAAT TTGCCCTCCC GGAAGCGCAG CGTCATCCTT CTATTATGCC CTGCGCTGTG TGGGAGTTTG ATAAGGCGGC GGCCTTGGCC GAAGCTATGC TGCCCGATAG TGACTTTTTA CTCGGCGACA CCTTGTCGGT TGCCGATATC CTGCTTGCCC ACACCCTCAT TTGGGGCACT TTATTTGAGC AGCAGATCCC GCCTAAATTG GCGGCGTATC GAGATAGAGT AGCGGCGCGT CCTTCGCGTA AATCGGCACT CGCTAAAATG GAAGCCGTCG CCAACGCAGC GCAGGCTTAA
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Protein sequence | MITLYGTPRS RALRVSWVLE ELGAEWAFSF VDMNKGEHRS AAFLALNPCG KVPVLTDDNL VLSESAAICL YLAEKFGQLL PAPGTTASGL HHQWVSFIIT ELEQPLWTMG KHKFALPEAQ RHPSIMPCAV WEFDKAAALA EAMLPDSDFL LGDTLSVADI LLAHTLIWGT LFEQQIPPKL AAYRDRVAAR PSRKSALAKM EAVANAAQA
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