Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3337 |
Symbol | |
ID | 4923092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3981099 |
End bp | 3981995 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164949 |
Product | hypothetical protein |
Protein accession | YP_001095462 |
Protein GI | 127514265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.491654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTAC TGCTAGCCAT GATCCCCGCC TTCTTCTGGG GCACCACATA CGCGGTGACC CAATATACGC TGCCGGATTG GCCTCCTCTG TTGCTTGGTG CCTTGCGAGC GCTGCCGGCC GGCCTTATCC TGCTGGCGAT CAGGCCCAGC CTGCCAAAGC GTCAGGAGTG GAGCCTGCTG TTTCGCCTAG GCTTTATCAA TATCGCCGCC TTCTTCAGCC TGATCTTCGT CATGGCCCTC ACCCTGCCCT CGGCCATCTC GGGCGTCGGC ATGATCTCTG TGCCTGTATT TGCCATGCTC TACCAGTGGC TGTTTCATGG GCGGCGCCCC GGCCTGACCC AGGGCTTCTT CGGCCTAGTG CTGATCGGCC TGGCCTGGCT ACTGTTTAAC CCCAACTCCA TCAGCCTCAA CCCCATAGGT CTGCTCGCCA TGCTGGCGGC CATCAGCTGC ATCATAGTCG GTAGCGGCAT CACTAAGGCT CTTGGGGATC GCATGCATTG GTGGACGGTA TTGACCTGGC AGCTGATCAT CGGCGGCGTG CTGCTGAGTG TAGCGGCAAG CGTGCATGCC TGGCTGGCGC CCCAAGGCTA TGGCAATGCG CTTAGCCAAC TCAGCCAGAA CAACCTTGTC GGCATCGGCT GGATCATCCT GCTCAATACC GTACTGGGTT ATATCATGTA TGTCTGGCTG TTGCAGCGCA TGAGCGTGGT GGACTTTACC TTTGGCGGCA TCGCAAACCC AGTGGCGGGT ATCGTCTCTG GCATGGTGCT GCTGGGCGAA TCTTTCACGC CGCATCAGTA CCTGCTGATG TTGGCTATGA TCGCCGCCTC ACTGATGCCA CAAATCATAG GCTTGATCGG TGAGCGCAGG CGTGTCGCTC AGACTAAAAT CCAATAG
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Protein sequence | MNVLLAMIPA FFWGTTYAVT QYTLPDWPPL LLGALRALPA GLILLAIRPS LPKRQEWSLL FRLGFINIAA FFSLIFVMAL TLPSAISGVG MISVPVFAML YQWLFHGRRP GLTQGFFGLV LIGLAWLLFN PNSISLNPIG LLAMLAAISC IIVGSGITKA LGDRMHWWTV LTWQLIIGGV LLSVAASVHA WLAPQGYGNA LSQLSQNNLV GIGWIILLNT VLGYIMYVWL LQRMSVVDFT FGGIANPVAG IVSGMVLLGE SFTPHQYLLM LAMIAASLMP QIIGLIGERR RVAQTKIQ
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