Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0033 |
Symbol | |
ID | 4841916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 36434 |
End bp | 37564 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640117245 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001048438 |
Protein GI | 126172289 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAC CCATGAAACG GTTAATTTTA CTCGCGTTAA TGACATTCAA TTGCACGTTT GTTGCCGCCG ATACCCTTAC GCTGAAAGCG GGGCATCCTG AGTCATATGT GGTGAAAAAG GGCGATACTC TTTGGGATAT CTCCGCAGCG TTTCTAAATG ATCCATGGAA ATGGCCTCGT CTTTGGGATG TAAACCCACA GATTGCCAAT CCCCATCTTA TTTATCCTGG CGATCAACTC ACGCTCGTGT TTGTCGATGG TCAGCCTCGG TTAGTGCGCA ATGGCGACAT GGTCGACAGT GCTAAACCCC ATGTGAAGAA AAGTCCTGAA GGACGGATCA TTGCCAAGAG CAATGCGATT CCTGCCGTCG ACTTGGCTTT GATTGAACAT TATTTAGTGC AGAATCGCGT TGTCGCAACC GACTGGCTTG CCGAGCAACC TATGGTATTA GCAGGTGAAA GCCCATCGCG TCACCATATT GTGGGTGATG TGATTTATAT TGATGCTGAA CTGCCGATGA ATCAAAAGTA CGGTGTTTAC GAACGTGGTC GCGAGTTTTT CAATAAAGCG TCTGGCGAAG CGATAGGACA AGAGGCCATT TTAGCATCAA CTGGGCAAGT GGTTGAGTCT GGTAAGGTTT CAAAAATTAA GTTGTTAACC AGCTTTCGTG AAACCAAAGC GGGTTTCAGA GTCATGCCGA TGGAAAGTGA TTCCTTGATG TCAGCTTACT TTACGCCAAA ACCGGCAGAG TTAAAGACGC CAGCCGTCGT GCTTGCTATT GAATCAAAGA TGCGTGAAGC GGGTAAGTTG GATGTGGTGT ACTTAGATAA AGGCACCCAA GATGGGGTTG AGCCCGGAGT CGTGTTTTCT ATTTACCGTG ATGGTGAAGT CATCGTCATC AACAATGATG GTATGCCAGT GCCTGCCACT GAGCGCACCG CCTACGATAA CTTAATGGCA TCTGTTTCAT CGGATCGCGC TATTCAAATG CCGGATATCT ATCATGGCAA GCTTTTGGTT TTCAAAGTGT TCGACAAAGC GAGCTTAGGT TTGATTGTCT CCACTGAGCG GCCTGTGCGT GTCGACGATA AGTTAATTGC CCCTGAGTCT TTAGCCTTAA GAGGTCAGTA A
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Protein sequence | MEIPMKRLIL LALMTFNCTF VAADTLTLKA GHPESYVVKK GDTLWDISAA FLNDPWKWPR LWDVNPQIAN PHLIYPGDQL TLVFVDGQPR LVRNGDMVDS AKPHVKKSPE GRIIAKSNAI PAVDLALIEH YLVQNRVVAT DWLAEQPMVL AGESPSRHHI VGDVIYIDAE LPMNQKYGVY ERGREFFNKA SGEAIGQEAI LASTGQVVES GKVSKIKLLT SFRETKAGFR VMPMESDSLM SAYFTPKPAE LKTPAVVLAI ESKMREAGKL DVVYLDKGTQ DGVEPGVVFS IYRDGEVIVI NNDGMPVPAT ERTAYDNLMA SVSSDRAIQM PDIYHGKLLV FKVFDKASLG LIVSTERPVR VDDKLIAPES LALRGQ
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