Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0447 |
Symbol | |
ID | 3918315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 490351 |
End bp | 491019 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640443176 |
Product | pseudouridylate synthase |
Protein accession | YP_495729 |
Protein GI | 87198472 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.129188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGATT TCTCCATCCT GTTCGAAGAC GGCGAGGCGC TGGTCATCGA CAAGCCGGCT GGCCTCCCGC TCGATCGTCC TCGCGCCGGT GGCGACAGCC TCGAGAACCA TCTCGATGCC CTGCGCTTCG GCTTCCAGCG CGAACCTTTC CCCGTTCACC GTCTCGACCG CGACACCTCT GGCTGCCTGT TGCTGGCGCG CAATCCCAAG GCGCTGAAGC GTTTCTCTGC CGCCTTCGAG GCGCGCGAGG TGGAGAAGGT CTATCTAGGC ATCGTCGCGG GCGAGGTTAC GGGCGAGAAG GGTACCATCG ACCTGGCGCT GTCCAAGGTC AGCTCCGCCG AGAAGGGCTG GCGGATGATC CCGGCCAGAA AGGGCAAGCC GGCACTTACC CACTGGCGCG TCGTCGCGCG AAAGCCGGGC CTCACGCTCG TCGAGTTCCG GCCCGAAACC GGCCGCACCC ACCAGATCCG CATCCACGCG CTGGCCGGGC TCGGCCATGC CCTCGTCGGG GATCCGGTCT ATGGCGATGG CAAGGGTGCG TGGCGCACCA TGCTCCATGC CTCGGATCTA GTCGTTCCGC GCGCGGGCAA GGCGCCGATC GTCGCCCACG CACCATTGCC GCTCGATTTC GACGCCTTCG GCTTCGAGCT TCCGGATGCC GGGGCCTGA
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Protein sequence | MIDFSILFED GEALVIDKPA GLPLDRPRAG GDSLENHLDA LRFGFQREPF PVHRLDRDTS GCLLLARNPK ALKRFSAAFE AREVEKVYLG IVAGEVTGEK GTIDLALSKV SSAEKGWRMI PARKGKPALT HWRVVARKPG LTLVEFRPET GRTHQIRIHA LAGLGHALVG DPVYGDGKGA WRTMLHASDL VVPRAGKAPI VAHAPLPLDF DAFGFELPDA GA
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