Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0074 |
Symbol | ruvA |
ID | 4437307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 62124 |
End bp | 62714 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639675837 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_819640 |
Protein GI | 116627021 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000176454 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATGATT ATATCAAGGG CACCCTAGTA AAAATCACAG CCAAACACAT TGTCATAGAA ACAAATGGTC TAGGATATAT TGTCACTGTG GCTAATCCCT ACAGCTTTTC TGATCAAATG AATCAGACTA TCCAAGTGTA TCTTCATCAA GTTATTAGAG ATGATGCCCA CCTACTTTTT GGTTTTCATA CTGAAGATGA GAAAGAAGTT TTTCTTAAGT TGATTTCTGT TTCTGGGATA GGTCCGACGA CTGCTCTAGC CATAGTGGCT GTGGATGATA ATCAGGGACT TGTTGCTGCT ATTGATAATA GTGACATCAA ATACCTGATG AAATTTCCAA AGATTGGTAA AAAGACTGCT CAACAAATGG TTCTTGATCT GGCAGGAAAA TTTGCAGAGT TACCAGCAGA AACGACCAAT ACTACGGCAA ATCAGACTGC AGGAAATCAA CAGTTGGATG AAGCTATGGA AGCTTTGCTT GCTCTTGGGT ACAAAGCCAC AGAGCTTAAG AAAGTGAAAG CCTTCTTTGA GGATACCAAT GAAACGGCAG AGCAATATAT TAAGTCCGCT CTTAAAATGT TGATGAAGTG A
|
Protein sequence | MYDYIKGTLV KITAKHIVIE TNGLGYIVTV ANPYSFSDQM NQTIQVYLHQ VIRDDAHLLF GFHTEDEKEV FLKLISVSGI GPTTALAIVA VDDNQGLVAA IDNSDIKYLM KFPKIGKKTA QQMVLDLAGK FAELPAETTN TTANQTAGNQ QLDEAMEALL ALGYKATELK KVKAFFEDTN ETAEQYIKSA LKMLMK
|
| |