Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0799 |
Symbol | rnc |
ID | 3241398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 798590 |
End bp | 799327 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637167459 |
Product | ribonuclease III |
Protein accession | YP_188382 |
Protein GI | 57866684 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.807465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTAACC AGAAAAAGAA AGAAATGGTA CATGATTTTC AACAAAAATT TACTGATAAA ATGAAGTCGT TAGGATTACA TTTTAAAAAT ATTGATTTAT ATCAACAAGC TTTCTCTCAT TCAAGTTTTA TTAATGACTT TAATATGAAT CGTTTAGAAC ACAACGAACG TTTAGAATTT TTAGGTGATG CGGTATTAGA ATTGACGGTT TCACGCTATC TTTTTGACAG ACATCCTCAT TTACCAGAAG GTAATTTGAC AAAGATGCGC GCAACAATTG TTTGTGAACC TTCACTTGTG ATATTTGCGA ATAAAATTAA ATTAAACGAA CTGATTTTAT TAGGTAAAGG TGAAGAGAAG ACAGGAGGCA GAACAAGACC TTCCCTTATT TCAGATGCTT TTGAAGCTTT TGTAGGTGCA CTATATTTAG ATCAAGGTTT AGACACAGTA TGGACATTTG CTGAAAAAGT TATCTTTCCG TATGTAGAAG ATGACGAGCT CGTTGGTGTC GTAGACTTTA AAACACAATT TCAAGAATAT GTGCATAGCC AAAATAAAGG AGATGTGACA TACCAATTAA TTAAAGAAGA GGGTCCCGCA CATCATAGAC TATTTACATC GGAAGTGATT TTAGAAAATA AAGCAGTTGC AGAGGGTAAA GGAAAGACAA AGAAGGAATC CGAACAAAAG GCAGCAGAAC AAGCGTATAA ACTAATGAAA AATAAAAAAT CATTATAA
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Protein sequence | MANQKKKEMV HDFQQKFTDK MKSLGLHFKN IDLYQQAFSH SSFINDFNMN RLEHNERLEF LGDAVLELTV SRYLFDRHPH LPEGNLTKMR ATIVCEPSLV IFANKIKLNE LILLGKGEEK TGGRTRPSLI SDAFEAFVGA LYLDQGLDTV WTFAEKVIFP YVEDDELVGV VDFKTQFQEY VHSQNKGDVT YQLIKEEGPA HHRLFTSEVI LENKAVAEGK GKTKKESEQK AAEQAYKLMK NKKSL
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