Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0030 |
Symbol | |
ID | 4897633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 39413 |
End bp | 40783 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640110606 |
Product | major facilitator transporter |
Protein accession | YP_001041922 |
Protein GI | 126460808 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.550857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCG CGCGACTTCG CATCTGGGGC TGGTATTTCT TCGACTGGGC GAGCCAGCCC TACAGCACCC TCCTCCTGAC CTTCGTCTTC GCGCCCTACT TCGCCGAGGT GGCGCGCGGG CGCTATCTGG CCGAAGGGAT GGACGCCGTG GCCGCGGGCG CGGCGGCGCA GTCGCTCTGG GCCACGGGCC TCGGGGCGGC CAGCCTTGTG GTGGCGCTGC TCGCGCCGCT TCTCGGGGCC GTCGCGGATG CGGGCGGGCG CAGGCTCGTC TGGATCTGGG GCTTCTCGGC CTTCTACATC CTGGGCTCGG CGGGGCTCTG GGCGCTGGCG CCGGGCGGAG ACGGCCTCGT CTGGGCGCTG GTCTGCTTCG GGCTGGGCTT CGTGGGGATG GAATTCGCGA CCATCTTCAC CAATGCGCTC CTGCCCTCGC TCGGGCCCCG CGACCGGATC GGCGAGATCT CGGGCTCGGG CTTCGCCTTC GGCTATCTGG GCGGCGTGCT GGCCCTGGCG CTGATGCTCC TCTTTCTGGC CGAGAGCGCG CAGACCGGGC GGACCCTCAT CGGCCTTCCA CCGGCCTTCG GCCTCGACCC GGAGCTGCGC GAGGGCACGC GCGCCGTGGG CCCCTTCACC GCCCTCTGGT ATGCGGTCTT TATGGTGCCC TTCTTCCTCT GGGTGCGCGA GCCCGCCCTG CCGCGCAGCC CTGTCCGGTT CGGCGCGGCT CTGGGCCAGC TCGGCAGCTT CCTCAGAAGC CTGCCCCGGC GGCGGAGCCT CGCGGCCTAT CTCGCCTCGT CGCTCCTTTA TCGCGACGCG CTGAACGCGC TCTACGGGTT CGGCGGCGTC TATGCCTCGG GCGTGCTCGG CTGGAGCATC ATCCAGATCG GCGTCTTCGG CGTGGTGGGC GCGGTGACGG CCACCGTCGC CTCATGGGTG GGAGGGCGCG CCGACCGGCG CTTCGGCCCG AAGCCCGTGA TCGCCGCCTG CATCCTGCTT CTGACGGCGG TCTGCATCGT GATCGTCGGC ACTGCGCGCG AAAGCCTCTT CGGCCAGCCG CTGCCCGAGG GCTCGCGCCT GCCCGACCTG ATCTTCTTCG GCTGCGGCGC GCTGATCGGC GGCGCGGGCG GGGCGCTTCA GGCCGCGAGC CGCACGCTGA TGGCCTGCCA CACCACGCCC GAGCGCGCGA CCGAGGCCTT CGGGATCTAC GCTCTGTCCG GCAAGGTCAC GAGTTTCCTC GCGCCGTTCC TGATCGCGCT CGCCACCGGC CTCAGCGGAT CGCAGCGCGC GGGCATCGCT CCGCTGATCC TTCTCTTCCT TGCGGGGCTC GTTCTGCTAG TCTGGGTGAA ACCGGGCGGC GAACAACGGG CAGTGACATG A
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Protein sequence | MARARLRIWG WYFFDWASQP YSTLLLTFVF APYFAEVARG RYLAEGMDAV AAGAAAQSLW ATGLGAASLV VALLAPLLGA VADAGGRRLV WIWGFSAFYI LGSAGLWALA PGGDGLVWAL VCFGLGFVGM EFATIFTNAL LPSLGPRDRI GEISGSGFAF GYLGGVLALA LMLLFLAESA QTGRTLIGLP PAFGLDPELR EGTRAVGPFT ALWYAVFMVP FFLWVREPAL PRSPVRFGAA LGQLGSFLRS LPRRRSLAAY LASSLLYRDA LNALYGFGGV YASGVLGWSI IQIGVFGVVG AVTATVASWV GGRADRRFGP KPVIAACILL LTAVCIVIVG TARESLFGQP LPEGSRLPDL IFFGCGALIG GAGGALQAAS RTLMACHTTP ERATEAFGIY ALSGKVTSFL APFLIALATG LSGSQRAGIA PLILLFLAGL VLLVWVKPGG EQRAVT
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