Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2893 |
Symbol | |
ID | 8020565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3045786 |
End bp | 3046619 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831680 |
Product | ABC transporter related |
Protein accession | YP_002982835 |
Protein GI | 241664475 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.267676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCACCC AGCCTTCCAA CGCCGTTGTC GAACTCGATC AGGTCGATTT CGCCTATCAG CCAGGCGCGC GGCGCATCCT GTCCGGCCTG TGCATGCGCG TGCCCAAGGG CAGCGTGGTG GCCGTCATGG GCGGCTCGGG CTGCGGCAAG ACGACGATTC TGCGGTTGAT TGGCGGCCAA GTGGCCGCTG CCGCCGGCAC TGTACGCGTG CACGGCCAGG ACATCGGCGC CATGGACAAG CGCGCGCTGT ACGCTGCGCG CCGCCAGATG GGCATGCTGT TCCAGTTCGG GGCGTTGTTC ACCGATCTGT CCGTGTTCGA CAATGTGGCA TTTCCACTGC GCGAACATAC CGAACTGCCC GAACTGCTCA TCCGCGATCT GGTGCTGATG AAGCTGAACG CCGTCGGCCT GCGCGGTGCG CGCGACCTGA TGCCTTCGGA AATTTCCGGC GGCATGGCCC GGCGCGTGGC GCTGGCGCGG GCGATTGCGC TGGATCCGTC GCTCATCCTC TATGACGAGC CGTTCGCTGG GCTGGACCCG ATCTCGCTGG GCCTGACCGC GTCGCTCATC CGCAAGCTGA ACGACGCGCT CGGCGCGACC AGCATCATCG TCTCGCACGA CGTGCAGGAG ACGTTCCACA TTGCCGATTA CGTCTACTTC ATTGCCAACG GTGGCATTGC TGCCGCAGGC ACGCCGGCTG AGCTGACCGC ATCGACCGAT CCGTTCGTCC GTCAGTTCGT GCACGGAGAG GCGGACGGTC CCGTGCCGTT CCACTATCCC GGGGCACCGC TGGCAGATGA CTTCGGTCTG GGCAAGAGCG GAGGCGCACG ATGA
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Protein sequence | MSTQPSNAVV ELDQVDFAYQ PGARRILSGL CMRVPKGSVV AVMGGSGCGK TTILRLIGGQ VAAAAGTVRV HGQDIGAMDK RALYAARRQM GMLFQFGALF TDLSVFDNVA FPLREHTELP ELLIRDLVLM KLNAVGLRGA RDLMPSEISG GMARRVALAR AIALDPSLIL YDEPFAGLDP ISLGLTASLI RKLNDALGAT SIIVSHDVQE TFHIADYVYF IANGGIAAAG TPAELTASTD PFVRQFVHGE ADGPVPFHYP GAPLADDFGL GKSGGAR
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