Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1166 |
Symbol | |
ID | 8018810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1234214 |
End bp | 1234963 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829948 |
Product | Silent information regulator protein Sir2 |
Protein accession | YP_002981130 |
Protein GI | 241662770 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00563616 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCG AACCTTCGGC CGCGTTCGAT GCGGCTGCAC TGGCCCAGGC TCACGCCTGG ATCGAGGCGG CCCAGCACAT CATGGTGCTC ACGGGCGCGG GCGTCTCGGC CGAATCGGGT GTGCCGACGT TTCGTGATGC ACTGACCGGC CTGTGGTCAC GGTTCAACCC GGAAGACATG GCCACCGAGG CCGCGTATCG CAAGCACCCG CGCATGGTCT GGGACTGGTA TCAGGAGCGC CGCGAGCGCG TGCTGCAGGC GCAGCCGAAT CCAGCCCATC TTGCGATTGC AGCGCTGGCC AGGCGCAAGA CGGTGACGCT CGTCACGCAG AACGTCGATG GCTTGCACCA GCGCGCCGGC AGCGAAGGCG TGATCGAACT GCACGGCAAC CTGTTTGCCA ACAAGTGGTT AGGTGGCTGT GGCAAATGCG ATATCGCCAC CGCCGAGCCG GGCAGGCCGC CGCGTTGTGC GACGTGTGGC GCGATGCTGC GCCCGGGCGT GGTGTGGTTT GGCGAGCAAC TGCCGCTGGT CGCGAACTAC CGTGCTGAAG AGGCAGCAAA CACGTGTGAT GTATGCCTCG TTGTTGGCAC GTCCGGCATG GTGTATCCGG CGGCCGGGCT GCCGGGGTTG GCAAAGGACC ACGGCGCCAA GGTGATCGTT GTGAATCCAG AGCCGAGTGC GCTGGATGCA ACCGCCGACC TGGTGATTCA TCAGCCGGCG GGCGTGTGCC TGCCCGCCAT GCTGGGATAA
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Protein sequence | MSIEPSAAFD AAALAQAHAW IEAAQHIMVL TGAGVSAESG VPTFRDALTG LWSRFNPEDM ATEAAYRKHP RMVWDWYQER RERVLQAQPN PAHLAIAALA RRKTVTLVTQ NVDGLHQRAG SEGVIELHGN LFANKWLGGC GKCDIATAEP GRPPRCATCG AMLRPGVVWF GEQLPLVANY RAEEAANTCD VCLVVGTSGM VYPAAGLPGL AKDHGAKVIV VNPEPSALDA TADLVIHQPA GVCLPAMLG
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