Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2434 |
Symbol | |
ID | 6410096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2623131 |
End bp | 2624735 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712313 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001991423 |
Protein GI | 192290818 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.097494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTC TTGAAGCGAC CGGTGGCGTG CCGGGACCGG GGCGGATCGG CCGCGTGGCG ATCGGCGATA TCTTGCGTAA ATCGGCGCGG CGGTTTCCGG AGCGCGTCGC GCTGACCGAT GGTGGCCGCA GCGTCACCTA CACCGAGCTG GAACGCGACG CCAACCGCTT CGCCAACGCG CTGGTGGCGC GCGGACTGAG GCCGGGCGCC AAGATCTCGA CCGTCTGCAA CAACTCGATC GAGTTCGTCA AAGCGCTGTT CGGCATTCAT CGCGCCGGCC TCGTCTGGGT GCCGATCAAC ACCATGCTCG GCCCCGACGA CATGGGCTAC ATCCTCGACC ACGCTGGCGT GAAGGTCGCG GTGATCGACG ACAATCTGTA CGGCCAGCCG GACCGCCGCG CCGCGCTGGA AGCGCGCGGC ATCGATCTCA TCGCCATCAA CCTGGCCGGC AAGGCCGCCG ACACCGGATT GCCGGTGTTT GATCAGCTGA TCGAGGGCCA GTCCGAGATC GAACCAGACG TCTCGTTCGA CGATCGCGAT CTGGCGATGA TCATCTACAC CTCGGGCACG ACCTCGCGGC CGAAGGGCGC GATGCACTGC CATCTCGCGG TCACCATGGC GGTGATGAGC AACGCGATAG AGATGCAATT GTCGCGCAAG GACGGCATCA CCGGGCAGTT TCCGCTGTTC CACTGCGCCG CCCATGTGCT GCTGCTGAGC TATTTGATCG TCGGCGGCCA GATGGCGATC ATGCGCGGGT TCGATCCGGT CGCCTGCATG GAGGCGATCC AGCGCGACAA GCTCACCGTG TTTATCGGCC TACCGCTGAT GTACCAGGTG ATCCTCGATC ATCCGCGGCG CAAGGAGTTC GATCTCTCCA GCTTGCGCTG CTGCATCTAC ACCATGGCGC CGATGCCGCG GCCGCTGCTC GAGCGTGCGA TCGCCGAGCT GTGCCCGACC TTCGTGCAGC CCTCGGGGCA GACCGAGATG TATCCGGCAA CGACGATGTC GCAGCCGGAC CGCCAGCTCG CTCGCTTCGG CAACTACTGG GGCGAGTCGA CGCTGGTCAA CGAGACCGCG ATCATGGACG ATGCCGGCAA TCTGTTGCCG CCCGGCGAGG TCGGCGAGAT CGTGCATCGC GGCCCCAACG TGATGCTTGG CTACTACAAG GACCCCGAGG CGACCGAAGC TGCGCGAAGA TTCGGCTGGC ACCACACCGG CGATCTGGCG CTGATCGACG AGCACGGCGA GGTGCTGTTC CTCGACCGCA AGAAGGACAT GATCAAGTCC GGCGGGGAGA ACGTTGCTTC GATCAAGATC GAGGAGACGC TGCTGGCGCA TCCGTCGGTG ATGAACGCCG CGGTGGTCGG CCTGCCGCAT CCGCAATGGG GCGAGGCGGT GTCCGGCTTC GTCAAGCTGA AGCCCGGCGC GTCCGCGACC GAGGCCGAGA TCATTGAACA TTGCAAGAAG CATCTCGGCG GCTTCCAGGT GCCGAAGCTG CTGCGGATCG TCGACGAGAT GCCGATGACC GCGACCGGCA AGCTGCGCAA GGTCGAGCTG CGCAATCAGT TCACCGATCA CTTCATGCTC GGTCAGACGG GGTGA
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Protein sequence | MTSLEATGGV PGPGRIGRVA IGDILRKSAR RFPERVALTD GGRSVTYTEL ERDANRFANA LVARGLRPGA KISTVCNNSI EFVKALFGIH RAGLVWVPIN TMLGPDDMGY ILDHAGVKVA VIDDNLYGQP DRRAALEARG IDLIAINLAG KAADTGLPVF DQLIEGQSEI EPDVSFDDRD LAMIIYTSGT TSRPKGAMHC HLAVTMAVMS NAIEMQLSRK DGITGQFPLF HCAAHVLLLS YLIVGGQMAI MRGFDPVACM EAIQRDKLTV FIGLPLMYQV ILDHPRRKEF DLSSLRCCIY TMAPMPRPLL ERAIAELCPT FVQPSGQTEM YPATTMSQPD RQLARFGNYW GESTLVNETA IMDDAGNLLP PGEVGEIVHR GPNVMLGYYK DPEATEAARR FGWHHTGDLA LIDEHGEVLF LDRKKDMIKS GGENVASIKI EETLLAHPSV MNAAVVGLPH PQWGEAVSGF VKLKPGASAT EAEIIEHCKK HLGGFQVPKL LRIVDEMPMT ATGKLRKVEL RNQFTDHFML GQTG
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