Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1970 |
Symbol | |
ID | 6409630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2128828 |
End bp | 2129892 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642711856 |
Product | hypothetical protein |
Protein accession | YP_001990968 |
Protein GI | 192290363 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGA TCACAAATGC CAAACTCTAC CCGCCCCGCC ACCCACGCGC CGCCCATCTC GCGCACCACC TTGCGGCCAT CGCACCCGGG GTGCTGGTGA CCGCCGCGAT CGCAGCCGCC GCGGTCGGCC TGCGCGCCAT TCCGGGCATG CCCGGGATCA GCCCTATGCT GCTGGCGATC CTGATCGGCA TCGTCGCCCA CAATGCGATC GGCACGCCGT CCTGGGCGGT ACCGGGCGTC AAGTTCAGCC TCCGGCGAGT GCTGCGCTTC GCCATCATCC TGCTCGGCCT GCAGCTCACC ACCGCGCAAC TGATCGAGGT CGGCGGCGAA GGGCTGGCGA TCATCGCCGC GACGCTGCTC GCCACCTTCT GCTTCACGGT GTGGTTCGGG CGCGTGCTCG GCGTCGACCG CAAGCTCGCC GAGCTGATCG CCGCCGGCAC CTCGATCTGC GGCGCGTCCG CGATCATCGC CACCAACACC GTGACCCGCG CCGACGACGA AGACGTTGCC TATGGCGTGG CCTGCGTCAC CGTGTTCGGT TCACTGGCGA TGGTCAGCTA TCCGCTGTTG CAGAACGTAC TCAATCTCGA CGCCCACGGT TTCGGGCTGT GGACCGGCGC CTCGATCCAC GAGATCGCGC AGGCCGTGGC GGTGAGCTTC CAGGGCGGAC AGCGCGCCGG CGAATTCGGC ACGATCGCCA AGCTGTCCCG GGTGATGATG CTGGCGCCGC TGGTGATTGG GCTCGGCATG CTGGCACGCG TCCGCGCCAA GCATCAGCCT GCCGGCGACC ACACTGCGAC ACCGCCGATG CCGTGGTTCG TGCTGGGCTT CGTGGCGATG ATCGGCGTCA ATGAGTTCGT CGCGATCCCG CACGAGGCCG AGAGCTGGAT CGTAACGATC ACCGCCTTCC TGCTCTCAAT GGCGCTGGCG GCGATGGGAC TGGAGACCGA CCTGCGCAAA CTTGCCGCGC GCGGCCTGCG CCCCGCTTTG CTCGGCCTCA CCGCGTCGCT GTTCATTGCC GGCTTCTCGC TGGCGCTGAT CAAACTCACA GGATGGCATG GATGA
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Protein sequence | MSLITNAKLY PPRHPRAAHL AHHLAAIAPG VLVTAAIAAA AVGLRAIPGM PGISPMLLAI LIGIVAHNAI GTPSWAVPGV KFSLRRVLRF AIILLGLQLT TAQLIEVGGE GLAIIAATLL ATFCFTVWFG RVLGVDRKLA ELIAAGTSIC GASAIIATNT VTRADDEDVA YGVACVTVFG SLAMVSYPLL QNVLNLDAHG FGLWTGASIH EIAQAVAVSF QGGQRAGEFG TIAKLSRVMM LAPLVIGLGM LARVRAKHQP AGDHTATPPM PWFVLGFVAM IGVNEFVAIP HEAESWIVTI TAFLLSMALA AMGLETDLRK LAARGLRPAL LGLTASLFIA GFSLALIKLT GWHG
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